RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 ATP6V0CP27449 155 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 PEX19P40855 299 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 RANBP1P43487 201 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 C1QTNF8P60827 252 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 UBE2KP61086 200 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 UBE2IP63279 158 aaKnown RBP-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 GNA12Q03113 381 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM267Q0VDI3 215 aaPredicted RBP-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 PAFAH1B3Q15102 231 aaKnown RBP-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 MIAQ16674 131 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM249Q2WGJ8 235 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 ACSM3Q53FZ2 586 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMCO2Q7Z6W1 182 aaPredicted RBP-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SPATA24Q86W54 205 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 C1orf158Q8N1D5 194 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SYS1Q8N2H4 156 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 OR8B3Q8NGG8 313 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 OR52K2Q8NGK3 314 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 OR13C8Q8NGS7 320 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 OR6N2Q8NGY6 317 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 DTD1Q8TEA8 209 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 MITD1Q8WV92 249 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TNFAIP8L1Q8WVP5 186 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SLC7A6Q92536 515 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMA16Q96EY4 203 aaKnown RBP-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 MRAP2Q96G30 205 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 ACY3Q96HD9 319 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM70Q9BUB7 260 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SYT4Q9H2B2 425 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 RGCCQ9H4X1 137 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 MS4A12Q9NXJ0 267 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 MAT2BQ9NZL9 334 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 VAPAQ9P0L0 249 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM216Q9P0N5 145 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 IFNKQ9P0W0 207 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SNX24Q9Y343 169 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 TIMM9Q9Y5J7 89 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 PEAK1Q9H792 1746 aa-0.27□□□□□ -2.45
SNHG3-203ENST00000447507 SYNRGQ9UMZ2 1314 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 A0A0J9YW62 118 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM269A0A1B0GVZ9 245 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 A0A1B0GX12 115 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 A0A1W2PPM0 123 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 A0A1W2PPV4 95 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 EFCAB9A8MZ26 197 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 UBDO15205 165 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 ADAP1O75689 374 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 NDUFB2O95178 105 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 NSA2O95478 260 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CLPSP04118 112 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 SHBGP04278 402 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 STAG3L3P0CL85 134 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 ZNF25P17030 456 aaPredicted RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 ALDH3A1P30838 453 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 RCVRNP35243 200 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 RPA3P35244 121 aaPredicted RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 DEKP35659 375 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CRATP43155 626 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CA7P43166 264 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 EVX1P49640 407 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 DSTNP60981 165 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 RAB4BP61018 213 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 C1DQ13901 141 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 ZNF345Q14585 488 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CDK10Q15131 360 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CAVIN4Q5BKX8 364 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 SPINK6Q6UWN8 80 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 AHSA2Q719I0 299 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 PID1Q7Z2X4 250 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 DCXRQ7Z4W1 244 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 LINC00523Q86TU6 105 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 DHFR2Q86XF0 187 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 SLC13A5Q86YT5 568 aaPredicted RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 GPHB5Q86YW7 130 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 TMEM86AQ8N2M4 240 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 Q8N814 137 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 C12orf29Q8N999 325 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CDRT4Q8N9R6 151 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 OR2D3Q8NGH3 330 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 OR6K2Q8NGY2 324 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 FAM45AQ8TCE6 357 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 DYNC2LI1Q8TCX1 351 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 AGR3Q8TD06 166 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 PATE1Q8WXA2 126 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 ACOT12Q8WYK0 555 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CATSPER2Q96P56 530 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 HBEGFQ99075 208 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 MYCBPQ99417 103 aaPredicted RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 SERPINI1Q99574 410 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 HINT2Q9BX68 163 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 PRRG3Q9BZD7 231 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 NKX6-2Q9C056 277 aaPredicted RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 OR8D2Q9GZM6 311 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CHST6Q9GZX3 395 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 IQCGQ9H095 443 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 CHRAC1Q9NRG0 131 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 UBQLN4Q9NRR5 601 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 NXT1Q9UKK6 140 aaKnown RBP-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 TIMM22Q9Y584 194 aa-0.28□□□□□ -2.45
SNHG3-203ENST00000447507 THSD7AQ9UPZ6 1657 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms