RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 OR6X1Q8NH79 312 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 GPX8Q8TED1 209 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 RNF133Q8WVZ7 376 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 C11orf40Q8WZ69 217 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 SLAMF6Q96DU3 332 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 CPNE2Q96FN4 548 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 ARL5BQ96KC2 179 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 AMELYQ99218 206 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 PRRT1Q99946 306 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 SLC25A21Q9BQT8 299 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 SEC22CQ9BRL7 303 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 UQCC2Q9BRT2 126 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 PBOV1Q9GZY1 135 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 EXO5Q9H790 373 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 METTL17Q9H7H0 456 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMEM138Q9NPI0 162 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 IFT46Q9NQC8 304 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 MED29Q9NX70 200 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 DKKL1Q9UK85 242 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 RAB22AQ9UL26 194 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 FLVCR2Q9UPI3 526 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 SLC22A13Q9Y226 551 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 U3KQ87 197 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 EML5Q05BV3 1969 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 PCDH15Q96QU1 1955 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 ARID1AO14497 2285 aa2.79□□□□□ -1.96
HMGB3P6-201ENST00000444896 CACNA1CQ13936 2221 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 FREM3P0C091 2139 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 IGHV1-45A0A0A0MS14 117 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 LINC00862A6NCI5 91 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 HMSDA8MTL9 139 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 GOSR2O14653 212 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 AKR7A2O43488 359 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TIMM8AO60220 97 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CD3DP04234 171 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 IFNA6P05013 189 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ACSM4P0C7M7 580 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 PGA4P0DJD7 388 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 PGA3P0DJD8 388 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 PTHLHP12272 177 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 MSR1P21757 451 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CD34P28906 385 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 AGTR1P30556 359 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ZNF93P35789 620 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CSNK1A1P48729 337 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CX3CR1P49238 355 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 PPOXP50336 477 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 SSR4P51571 173 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 DSCR4P56555 118 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TAS2R31P59538 309 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 LSM6P62312 80 aaKnown RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 RPS15P62841 145 aaKnown RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 GRK1Q15835 563 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 RSPO1Q2MKA7 263 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 SCGB2B2Q4G0G5 96 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMEM255AQ5JRV8 349 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CLLU1Q5K131 121 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CLVS2Q5SYC1 327 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 RAET1LQ5VY80 246 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 C16orf47Q6ZP98 133 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 IDO2Q6ZQW0 420 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMPPEQ6ZT21 453 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OR2W3Q7Z3T1 314 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ABHD12BQ7Z5M8 362 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TRAPPC6BQ86SZ2 158 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 GTPBP8Q8N3Z3 284 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ZNF283Q8N7M2 679 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ZDHHC22Q8N966 263 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ACBD4Q8NC06 268 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CHST4Q8NCG5 386 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ZNF680Q8NEM1 530 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OR51A2Q8NGJ7 313 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OR51G1Q8NGK1 321 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OR13C9Q8NGT0 318 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OR8S1Q8NH09 359 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ANGPTL6Q8NI99 470 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 SPTSSAQ969W0 71 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 FAM210BQ96KR6 192 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 SCGB3A2Q96PL1 93 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 GPER1Q99527 375 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 S100A13Q99584 98 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 PDCD10Q9BUL8 212 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 EMC6Q9BV81 110 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMEM59Q9BXS4 323 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CST11Q9H112 138 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ALX4Q9H161 411 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TMEM185BQ9H7F4 350 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 FAM206AQ9NX38 181 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 SLC2A8Q9NY64 477 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CALYQ9NYX4 217 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 COMMD9Q9P000 198 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 CYB5R1Q9UHQ9 305 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 NOP16Q9Y3C1 178 aaKnown RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 U3KQA8 63 aa2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 ASCC3Q8N3C0 2202 aaKnown RBP2.78□□□□□ -1.96
HMGB3P6-201ENST00000444896 TNRC6BQ9UPQ9 1833 aaKnown RBP2.77□□□□□ -1.97
HMGB3P6-201ENST00000444896 PI4KAP42356 2102 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms