RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 RAB5BP61020 215 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 TEX36Q5VZQ5 186 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SP5Q6BEB4 398 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF788Q6ZQV5 615 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 FAM216BQ8N7L0 139 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 RCC1LQ96I51 464 aaKnown RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SCNM1Q9BWG6 230 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 EGLN1Q9GZT9 426 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SAV1Q9H4B6 383 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 TUBA4BQ9H853 241 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 NGBQ9NPG2 151 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SLC39A9Q9NUM3 307 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 CISD1Q9NZ45 108 aaKnown RBP8.63□□□□□ -1.03
CPNE1-218ENST00000439806 SSUH2Q9Y2M2 353 aa8.63□□□□□ -1.03
CPNE1-218ENST00000439806 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 A0A1W2PPE3 182 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 hADV38S2A0JD32 116 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 COLCA2A8K830 154 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 C1orf196B1AJZ1 125 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 H3BQ15 152 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 PROP1O75360 226 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 CRYBA1P05813 215 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 THBDP07204 575 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 BCL2P10415 239 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 DAOP14920 347 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 NDUFB7P17568 137 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 HOXA1P49639 335 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 GNG10P50151 68 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 GNB2P62879 340 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 MRPS11P82912 194 aaKnown RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 BSPH1Q075Z2 132 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 TFF3Q07654 80 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 ADIPOQQ15848 244 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 DUX4L9Q6RFH8 374 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 CENPVQ7Z7K6 275 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF429Q86V71 674 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 C1orf87Q8N0U7 546 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 LYG1Q8N1E2 194 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 OR52E5Q8NH55 327 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 RND1Q92730 232 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 CORO2AQ92828 525 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 LEAP2Q969E1 77 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 LHX4Q969G2 390 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 TVP23CQ96ET8 276 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 BIN3Q9NQY0 253 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 JKAMPQ9P055 326 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
CPNE1-218ENST00000439806 COL6A3P12111 3177 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
CPNE1-218ENST00000439806 TET2Q6N021 2002 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 A0A1W2PPH5 198 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 C15orf62A8K5M9 175 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 IFNA10P01566 189 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 MT-ND4LP03901 98 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 FBP1P09467 338 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 SAA2P0DJI9 122 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 FOLR2P14207 255 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 RAB13P51153 203 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF134P52741 427 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 CCL8P80075 99 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 TLE1Q04724 770 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 HNF4GQ14541 408 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 CT45A1Q5HYN5 189 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 ADAM5Q6NVV9 412 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 ACSM6Q6P461 480 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 RBMS3Q6XE24 437 aaKnown RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 CT45A3Q8NHU0 189 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 RAB39BQ96DA2 213 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 SNRNP40Q96DI7 357 aaKnown RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 DYNLRB1Q9NP97 96 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 ENY2Q9NPA8 101 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 HEYLQ9NQ87 328 aaPredicted RBP8.61□□□□□ -1.03
CPNE1-218ENST00000439806 DOCK11Q5JSL3 2073 aa8.61□□□□□ -1.03
CPNE1-218ENST00000439806 PPIAL4EA0A075B759 164 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 A0A1W2PPE2 198 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 SMCO3A2RU48 225 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 PPIAL4DF5H284 164 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 OR2C1O95371 312 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 HRASP01112 189 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 PPIAL4FP0DN26 164 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 CASP6P55212 293 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 RAB11AP62491 216 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 RELBQ01201 579 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms