RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, human

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE1-215	ENST00000437100	FAU	P35544	74 aa	Known RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	ECI1	P42126	302 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	SURF2	Q15527	256 aa	Predicted RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	MMD	Q15546	238 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	RTL8B	Q17RB0	113 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	SCGB2B2	Q4G0G5	96 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	IDO2	Q6ZQW0	420 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	TCTEX1D2	Q8WW35	142 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	FLYWCH2	Q96CP2	140 aa	Known RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	ZNF486	Q96H40	463 aa	Predicted RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	MDFI	Q99750	246 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	WDR12	Q9GZL7	423 aa	Known RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	LIN7C	Q9NUP9	197 aa	Known RBP	11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	PRELID3B	Q9Y3B1	194 aa		11.73	□□□□□ -0.53
CPNE1-215	ENST00000437100	SRRM4	A7MD48	611 aa	Known RBP	11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	RNF212B	A8MTL3	300 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	NBR2	O15453	112 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	CRYGB	P07316	175 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	CTSD	P07339	412 aa	Predicted RBP	11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	VSIG10L2	P0DP72	767 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	KIR2DS2	P43631	304 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	CATR1	Q13166	79 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	ZNF846	Q147U1	533 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	PHLDA2	Q53GA4	152 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	CMTM1	Q8IZ96	169 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	OR4F5	Q8NH21	305 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	LINC01006	Q8NI28	216 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	MARCH1	Q8TCQ1	289 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	SLC2A9	Q9NRM0	540 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	SCP2D1	Q9UJQ7	156 aa		11.72	□□□□□ -0.53
CPNE1-215	ENST00000437100	SH2D7	A6NKC9	451 aa	Predicted RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	RRH	O14718	337 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	RAMP3	O60896	148 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	FCGR3B	O75015	233 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	CRYZL1	O95825	349 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	RLN1	P04808	185 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	BTC	P35070	178 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	LGALS7	P47929	136 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	PSG5	Q15238	335 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	C5orf64	Q2M2E5	130 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	ABCA11P	Q4W5N1	156 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	OR2B11	Q5JQS5	317 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	ZNF57	Q68EA5	555 aa	Predicted RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	OR4S2	Q8NH73	311 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	OSR1	Q8TAX0	266 aa	Predicted RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	TSNAX	Q99598	290 aa	Known RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	C7orf50	Q9BRJ6	194 aa	Known RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	PRSS22	Q9GZN4	317 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	C5orf66	Q9H5L9	145 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	MCUB	Q9NWR8	336 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100	GPR132	Q9UNW8	380 aa		11.71	□□□□□ -0.53
CPNE1-215	ENST00000437100		A0A1B0GUS0	222 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	CLPSL1	A2RUU4	121 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	NAP1L6	A6NFF2	107 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	NCBP2L	A6PVI3	153 aa	Known RBP	11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	PLA2G10	O15496	165 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	PGAM2	P15259	253 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	PI3	P19957	117 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	MDK	P21741	143 aa	Predicted RBP	11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	F2R	P25116	425 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	RPS16	P62249	146 aa	Known RBP	11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	FOXL1	Q12952	345 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	CBX3	Q13185	183 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	AWAT1	Q58HT5	328 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	TBC1D26	Q86UD7	250 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	SPAG16	Q8N0X2	631 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	OR51H1	Q8NH63	302 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	ZFAND1	Q8TCF1	268 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	HARBI1	Q96MB7	349 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	SERTAD4	Q9NUC0	356 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	VSIG4	Q9Y279	399 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	SIGLEC9	Q9Y336	463 aa		11.7	□□□□□ -0.54
CPNE1-215	ENST00000437100	MPPED1	O15442	326 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	IGHG2	P01859	326 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	HLA-DRB1	P01911	266 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	PIGP	P57054	158 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	PROK1	P58294	105 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	UBE2K	P61086	200 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	POU2AF1	Q16633	256 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	MRGPRG-AS1	Q2M3A8	158 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	ZNF585B	Q52M93	769 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	TCTEX1D1	Q8N7M0	179 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	CD300LF	Q8TDQ1	290 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	HSPB9	Q9BQS6	159 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	WNT10A	Q9GZT5	417 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	KIAA1456	Q9P272	454 aa		11.69	□□□□□ -0.54
CPNE1-215	ENST00000437100	SHOX	O15266	292 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	SLC25A17	O43808	307 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	PEX14	O75381	377 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	UPK1B	O75841	260 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	S100G	P29377	79 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	INPP1	P49441	399 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	SSBP2	P81877	361 aa	Predicted RBP	11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	OR2T6	Q8NHC8	308 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	WIPF2	Q8TF74	440 aa	Predicted RBP	11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	TMEM230	Q96A57	120 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	RASL11B	Q9BPW5	248 aa		11.68	□□□□□ -0.54
CPNE1-215	ENST00000437100	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.68	□□□□□ -0.54

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