RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 TRAPPC2LQ9UL33 140 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 KCNS2Q9ULS6 477 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 FZR1Q9UM11 496 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 FBXO7Q9Y3I1 522 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 MMP24Q9Y5R2 645 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 SLC25A15Q9Y619 301 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 WSB1Q9Y6I7 421 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 CSMD2Q7Z408 3487 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 SPTA1P02549 2419 aa2.27□□□□□ -2.05
LINC00407-201ENST00000426509 ESPL1Q14674 2120 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MED12LQ86YW9 2145 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IGHV3-43A0A0B4J1X8 118 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 PIGBOS1A0A0B4J2F0 54 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 UBE2L5PA0A1B0GUS4 154 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 hCG_1809904A0A1W2PP81 198 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 A0A1W2PR64 198 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 A0A1W2PRV1 198 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ODAMA1E959 279 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MBD3L4A6NDZ8 208 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MBD3L3A6NE82 208 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RBFOX3A6NFN3 312 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 OOEPA6NGQ2 149 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MBD3L5A6NJ08 208 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 OR5H1A6NKK0 313 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 AHRRA9YTQ3 701 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 SRRM5B3KS81 715 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IFNL4K9M1U5 179 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 M0R036 132 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RAB29O14966 203 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 HSPA12AO43301 675 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 TIMM8AO60220 97 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RAMP3O60896 148 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 TOX4O94842 621 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 S1PR2O95136 353 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IFNA5P01569 189 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IGKV1D-33P01593 117 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IGKV1-33P01594 117 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 HBE1P02100 147 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MT-ND4LP03901 98 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 HSPB1P04792 205 aaKnown RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IFNA4P05014 189 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 SERPINE2P07093 398 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 FBP1P09467 338 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 METTL15P1P0C7V9 234 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 OR13C7P0DN81 318 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CGB3P0DN86 165 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CGB7P0DN87 165 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 IGHV3-43DP0DP04 118 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 AGAP20933 346 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 TUBG1P23258 451 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 PTAFRP25105 342 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 S100GP29377 79 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 SSTR5P35346 364 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 G6PCP35575 357 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CEACAM6P40199 344 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 GLIPR1P48060 266 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 HOXA1P49639 335 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 NKX6-1P78426 367 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 COL10A1Q03692 680 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 AESQ08117 197 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RHEBQ15382 184 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CDSNQ15517 529 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 LRRC75BQ2VPJ9 315 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 DEFB109BQ30KR1 87 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ZNF718Q3SXZ3 478 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RNF212Q495C1 297 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 AKIRIN2Q53H80 203 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 SPRNQ5BIV9 151 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 TMEM41BQ5BJD5 291 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 SOHLH1Q5JUK2 328 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 UTF1Q5T230 341 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 AKR1C8PQ5T2L2 129 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 FAM90A2PQ658T7 463 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ACSM6Q6P461 480 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ZNF474Q6S9Z5 364 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 FIP1L1Q6UN15 594 aaKnown RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 BHLHA15Q7RTS1 189 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CENPVQ7Z7K6 275 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 LRP11Q86VZ4 500 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 STX12Q86Y82 276 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 FAM90A1Q86YD7 464 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ZFP82Q8N141 532 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 PRR18Q8N4B5 295 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RPRMLQ8N4K4 120 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ZNF808Q8N4W9 903 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 ZNF645Q8N7E2 425 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CYB561D1Q8N8Q1 229 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CNEP1R1Q8N9A8 125 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 OR10G4Q8NGN3 311 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 OR13A1Q8NGR1 328 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MBD3L2Q8NHZ7 208 aaPredicted RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 RNASE11Q8TAA1 199 aaKnown RBP2.26□□□□□ -2.05
LINC00407-201ENST00000426509 Q8TCH9 128 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CD300LFQ8TDQ1 290 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MRGPRDQ8TDS7 321 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 CA5BP1Q8WTZ4 195 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 LRRC29Q8WV35 223 aa2.26□□□□□ -2.05
LINC00407-201ENST00000426509 MBD3L1Q8WWY6 194 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms