RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 PHB2Q99623 299 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 YTHDF1Q9BYJ9 559 aaKnown RBP12.37□□□□□ -0.43
COL18A1-205ENST00000423214 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 KCNK7Q9Y2U2 307 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 RBM7Q9Y580 266 aaKnown RBP12.37□□□□□ -0.43
COL18A1-205ENST00000423214 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
COL18A1-205ENST00000423214 A0A075B6Q4 140 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 H0Y980 276 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 SHOXO15266 292 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 FABP7O15540 132 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 AADACP22760 399 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 OR9G4Q8NGQ1 327 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 OR10J5Q8NHC4 309 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
COL18A1-205ENST00000423214 TXNL4BQ9NX01 149 aaKnown RBP12.36□□□□□ -0.43
COL18A1-205ENST00000423214 LYSTQ99698 3801 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 FCGR3AP08637 254 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 GNB3P16520 340 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 GADD45AP24522 165 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
COL18A1-205ENST00000423214 PJVKQ0ZLH3 352 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 RPEL1Q2QD12 228 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 LCN12Q6JVE5 192 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 Q8N1Y9 231 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 CABLES2Q9BTV7 478 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 TINAGL1Q9GZM7 467 aaPredicted RBP12.35□□□□□ -0.43
COL18A1-205ENST00000423214 OR51E2Q9H255 320 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
COL18A1-205ENST00000423214 RRP15Q9Y3B9 282 aaKnown RBP12.35□□□□□ -0.43
COL18A1-205ENST00000423214 CSMD3Q7Z407 3707 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 A8MZ25 164 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 MPPED1O15442 326 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 GALP22466 123 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 SSBP2P81877 361 aaPredicted RBP12.34□□□□□ -0.43
COL18A1-205ENST00000423214 KLF5Q13887 457 aaPredicted RBP12.34□□□□□ -0.43
COL18A1-205ENST00000423214 VMA21Q3ZAQ7 101 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 IGSF11Q5DX21 431 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 ZNF773Q6PK81 442 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 BVESQ8NE79 360 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 MAFIPQ8WZ33 124 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 FCGR1BQ92637 280 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 GINS4Q9BRT9 223 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 C19orf73Q9NVV2 129 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 PEF1Q9UBV8 284 aaKnown RBP12.34□□□□□ -0.43
COL18A1-205ENST00000423214 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
COL18A1-205ENST00000423214 LCE6AA0A183 80 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 RAB27BO00194 218 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 APELAP0DMC3 54 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 RRASP10301 218 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
COL18A1-205ENST00000423214 NEDD8Q15843 81 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 TNXAQ16473 311 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 RNF167Q9H6Y7 350 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 TUBA4BQ9H853 241 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 ZNF230Q9UIE0 474 aaPredicted RBP12.33□□□□□ -0.44
COL18A1-205ENST00000423214 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
COL18A1-205ENST00000423214 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 STARD9Q9P2P6 4700 aa12.33□□□□□ -0.44
COL18A1-205ENST00000423214 DIRAS3O95661 229 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 CRYGBP07316 175 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 GSTT2P0CG29 244 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 GSTT2BP0CG30 244 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 RAB6AP20340 208 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 DYRK1AQ13627 763 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 ZNF343Q6P1L6 599 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 Q8N402 240 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 ADTRPQ96IZ2 230 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 GAR1Q9NY12 217 aaKnown RBP12.32□□□□□ -0.44
COL18A1-205ENST00000423214 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
COL18A1-205ENST00000423214 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 METTL21EPA6NDL7 271 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 MFNGO00587 321 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
COL18A1-205ENST00000423214 OR2A4O95047 310 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 BRI3O95415 125 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 CRYZL1O95825 349 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 IFNA6P05013 189 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 CLEC2LP0C7M8 214 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 OR9G9P0C7N8 305 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 HIST1H1DP16402 221 aaKnown RBP12.31□□□□□ -0.44
COL18A1-205ENST00000423214 TALDO1P37837 337 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 MXD1Q05195 221 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 ARFRP1Q13795 201 aa12.31□□□□□ -0.44
COL18A1-205ENST00000423214 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms