RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TRBV5-4A0A0C4DH59 114 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 A0A0G2JMM0 328 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SMIM28A0A1B0GU29 152 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 A0A1W2PPB8 328 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 A6NDN8 102 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR2AG2A6NM03 316 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CPSF4LA6NMK7 179 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 HIDE1A8MVS5 230 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KIR3DP1A8MWS1 328 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZNF732B4DXR9 585 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TMEM250H0YL14 139 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SLC33A1O00400 549 aaPredicted RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 HMGN4O00479 90 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SOCS3O14543 225 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ARPC3O15145 178 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ST8SIA3O43173 380 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZNF207O43670 478 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PDE6DO43924 150 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 RAD51DO75771 328 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KBTBD11O94819 623 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 GJB5O95377 273 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CDS2O95674 445 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 NRASP01111 189 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KRASP01116 189 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 HLA-DRB1P01911 266 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CATP04040 527 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 MAS1P04201 325 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PIRTP0C851 137 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 IGLC1P0CG04 106 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PPIAL4FP0DN26 164 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PPIAL4GP0DN37 164 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CRISP2P16562 243 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ADRA2CP18825 462 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KITLGP21583 273 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PSMB5P28074 263 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR1D2P34982 312 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 HRH1P35367 487 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 GNG4P50150 75 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 GPM6AP51674 278 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SGSHP51688 502 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TAS2R46P59540 309 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PLP1P60201 277 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 KRTDAPP60985 99 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SEC11AP67812 179 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ARG2P78540 354 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 Q0VG73 95 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 FUT5Q11128 374 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SRSF9Q13242 221 aaKnown RBP eCLIP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PCK2Q16822 640 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 LTC4SQ16873 150 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TMEM249Q2WGJ8 235 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TDRG1Q3Y452 100 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SPATA46Q5T0L3 261 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 STUMQ69YW2 141 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZNF880Q6PDB4 577 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 WDR82Q6UXN9 313 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 NEGR1Q7Z3B1 354 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CALHM1Q8IU99 346 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 FAM58AQ8N1B3 248 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZNF676Q8N7Q3 588 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 C5orf17Q8NAS9 161 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR10P1Q8NGE3 313 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR1B1Q8NGR6 318 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR1N2Q8NGR9 330 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR5H2Q8NGV7 314 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SLC25A40Q8TBP6 338 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 FGF13Q92913 245 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 WDR34Q96EX3 536 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 WDR90Q96KV7 1748 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SPATA33Q96N06 139 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 MCHR1Q99705 422 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SPIN2AQ99865 258 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SPIN2BQ9BPZ2 258 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 SMIM7Q9BQ49 75 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PMCHL2Q9BQD1 86 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 RSG1Q9BU20 258 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 NUDT9Q9BW91 350 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 CXCL16Q9H2A7 254 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 LINC00597Q9H2U6 94 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 METTL7AQ9H8H3 244 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZDHHC11Q9H8X9 412 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ST20Q9HBF5 79 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 MANBALQ9NQG1 85 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 NYNRINQ9P2P1 1898 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TRAPPC2LQ9UL33 140 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ANAPC10Q9UM13 185 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 LSM5Q9Y4Y9 91 aaKnown RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 PXMP4Q9Y6I8 212 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 TRIP11Q15643 1979 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 COL4A4P53420 1690 aaPredicted RBP2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 ANKRD12Q6UB98 2062 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 MYLKQ15746 1914 aa2.72□□□□□ -1.97
SDCBPP3-201ENST00000419629 THSD7BQ9C0I4 1608 aa2.71□□□□□ -1.97
SDCBPP3-201ENST00000419629 TRAV9-2A0A087WT02 112 aa2.71□□□□□ -1.98
SDCBPP3-201ENST00000419629 A0A0U1RQK1 487 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms