RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 LFNGQ8NES3 379 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 OR10R2Q8NGX6 335 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 RHOVQ96L33 236 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 MS4A10Q96PG2 267 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 VCX3AQ9NNX9 186 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 DAPK2Q9UIK4 370 aa7.29□□□□□ -1.24
NUP50-205ENST00000419387 ELF5Q9UKW6 265 aaPredicted RBP7.29□□□□□ -1.24
NUP50-205ENST00000419387 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 A0A087WW49 117 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 TRBV6-7A0A0A0MS04 114 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 METTL21EPA6NDL7 271 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 ARPC1BO15143 372 aaKnown RBP7.28□□□□□ -1.24
NUP50-205ENST00000419387 BET1O15155 118 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SLC25A17O43808 307 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SAP30O75446 220 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 DIRAS3O95661 229 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 IGHV3-11P01762 117 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
NUP50-205ENST00000419387 OR8U9P0C7N5 309 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 GSTT2P0CG29 244 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 GSTT2BP0CG30 244 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 GNB3P16520 340 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 RAB6AP20340 208 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 LGALS7P47929 136 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 TPPP2P59282 170 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 FXYD3Q14802 87 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 TIMM50Q3ZCQ8 353 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 IGSF11Q5DX21 431 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 OR10J5Q8NHC4 309 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 ARPC1AQ92747 370 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SLC25A46Q96AG3 418 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 ASCL2Q99929 193 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 CABLES2Q9BTV7 478 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 RBM38Q9H0Z9 239 aaKnown RBP7.28□□□□□ -1.24
NUP50-205ENST00000419387 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SLA2Q9H6Q3 261 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SDHAF2Q9NX18 166 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 SMAD5-AS1Q9Y6J3 95 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 CEPT1Q9Y6K0 416 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 U3KQK5 164 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
NUP50-205ENST00000419387 A0A075B6Q4 140 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 MFNGO00587 321 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 CNIH1O95406 144 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 IGLV2-23P01705 113 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 TRGV3P03979 118 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 CRYGBP07316 175 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 HIST1H1DP16402 221 aaKnown RBP7.27□□□□□ -1.25
NUP50-205ENST00000419387 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
NUP50-205ENST00000419387 CBX3Q13185 183 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 SPCS2Q15005 226 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 SRSF7Q16629 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
NUP50-205ENST00000419387 ACSM6Q6P461 480 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 GPR141Q7Z602 305 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 OR5T1Q8NG75 326 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 GRPEL2Q8TAA5 225 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 LGALS14Q8TCE9 139 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 MAFIPQ8WZ33 124 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 TMEM68Q96MH6 324 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 ZNF355PQ9NSJ1 428 aa7.27□□□□□ -1.25
NUP50-205ENST00000419387 ZNF230Q9UIE0 474 aaPredicted RBP7.27□□□□□ -1.25
NUP50-205ENST00000419387 RBM7Q9Y580 266 aaKnown RBP7.27□□□□□ -1.25
NUP50-205ENST00000419387 SRRM4A7MD48 611 aaKnown RBP7.26□□□□□ -1.25
NUP50-205ENST00000419387 H3BUA1 57 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 RRASP10301 218 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 SPNP16150 400 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 TALDO1P37837 337 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 TMBIM6P55061 237 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 SCAND1P57086 179 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 SSBP2P81877 361 aaPredicted RBP7.26□□□□□ -1.25
NUP50-205ENST00000419387 PJVKQ0ZLH3 352 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 ARFRP1Q13795 201 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 ARL6IP1Q15041 203 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 TMEM177Q53S58 311 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 IDNKQ5T6J7 187 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 Q6ZS49 121 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 POC5Q8NA72 575 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 BVESQ8NE79 360 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 OR6Q1Q8NGQ2 317 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 DYNC2LI1Q8TCX1 351 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 C5orf30Q96GV9 206 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 HARBI1Q96MB7 349 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 GINS4Q9BRT9 223 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 ATG5Q9H1Y0 275 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 RANGRFQ9HD47 186 aaPredicted RBP7.26□□□□□ -1.25
NUP50-205ENST00000419387 SPATA2Q9UM82 520 aa7.26□□□□□ -1.25
NUP50-205ENST00000419387 KMT2CQ8NEZ4 4911 aaKnown RBP7.26□□□□□ -1.25
NUP50-205ENST00000419387 A0A0G2JLM5 398 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 C13orf42A0A1B0GVH6 325 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 H3BMQ9 156 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 SHOXO15266 292 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 TMEM127O75204 238 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 BRI3O95415 125 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 GP9P14770 177 aa7.25□□□□□ -1.25
NUP50-205ENST00000419387 DUTP33316 252 aaKnown RBP7.25□□□□□ -1.25
NUP50-205ENST00000419387 PITPNAQ00169 270 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms