RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 CDC42EP3Q9UKI2 254 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 DMRTA2Q96SC8 542 aa10.33□□□□□ -0.76
UBR4-205ENST00000417040 ZNF638Q14966 1978 aaKnown RBP10.33□□□□□ -0.76
UBR4-205ENST00000417040 A0A087WV48 116 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 GDF9O60383 454 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 ZXDCQ2QGD7 858 aaPredicted RBP10.32□□□□□ -0.76
UBR4-205ENST00000417040 RAB1CQ92928 201 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 SRXN1Q9BYN0 137 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 A6NJY4 79 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 OIT3Q8WWZ8 545 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 COL18A1P39060 1754 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 IGHV4-34P06331 123 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 RIPPLY3P57055 190 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 UBALD2Q8IYN6 164 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 MAFAQ8NHW3 353 aaPredicted RBP10.32□□□□□ -0.76
UBR4-205ENST00000417040 CD8AP01732 235 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 PRSS2P07478 247 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 S4R3C0 116 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 RBFOX2O43251 390 aaKnown RBP eCLIP10.32□□□□□ -0.764e-7■■■■□ 24.7
UBR4-205ENST00000417040 NPIPB7O75200 414 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 MOSP00540 346 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 LGALS3P17931 250 aaKnown RBP10.32□□□□□ -0.76
UBR4-205ENST00000417040 ANOS1P23352 680 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 DLX6P56179 175 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
UBR4-205ENST00000417040 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 SPSB4Q96A44 273 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 DNAJC4Q9NNZ3 241 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 TMEM74BQ9NUR3 256 aa10.32□□□□□ -0.76
UBR4-205ENST00000417040 TRAV8-6A0A0B4J262 113 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 TSPAN13O95857 204 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 KCNMB1Q16558 191 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 CARHSP1Q9Y2V2 147 aaKnown RBP10.31□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3-66A0A0C4DH42 116 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 MARCH11A6NNE9 402 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 ATP5G3P48201 142 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 KCNS1Q96KK3 526 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 Q96M66 194 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 PILRAQ9UKJ1 303 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 KCNMB2Q9Y691 235 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 PRF1P14222 555 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 TRIP6Q15654 476 aaKnown RBP10.31□□□□□ -0.76
UBR4-205ENST00000417040 ASCL5Q7RTU5 278 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 ITLN1Q8WWA0 313 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 IL9P15248 144 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 LINC01590Q5TEZ4 76 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 SOX21Q9Y651 276 aaPredicted RBP10.31□□□□□ -0.76
UBR4-205ENST00000417040 TUBGCP6Q96RT7 1819 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 CGAP01215 116 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 GCHFRP30047 84 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 RPL27AP46776 148 aaKnown RBP10.31□□□□□ -0.76
UBR4-205ENST00000417040 CX3CL1P78423 397 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 PRR31Q5SQ13 230 aa10.31□□□□□ -0.76
UBR4-205ENST00000417040 RTBDNQ9BSG5 229 aaPredicted RBP10.31□□□□□ -0.76
UBR4-205ENST00000417040 PIKFYVEQ9Y2I7 2098 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 PPIAL4EA0A075B759 164 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 IGHV1-45A0A0A0MS14 117 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 PPIAL4DF5H284 164 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 PPIAL4FP0DN26 164 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 PPIAL4AQ9Y536 164 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 PROB1E7EW31 1015 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 TYMSP04818 313 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 BTCP35070 178 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 OR10AG1Q8NH19 301 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 OR4A5Q8NH83 315 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 RPRMQ9NS64 109 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 ATXN7O15265 892 aaPredicted RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 RPL39P5Q59GN2 51 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 INO80CQ6PI98 192 aaPredicted RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 A0A0G2JK05 382 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 A0A1W2PQF6 199 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 KLF4O43474 513 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 C1orf210Q8IVY1 113 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 SLC25A28Q96A46 364 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 WDYHV1Q96HA8 205 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 GMPPAQ96IJ6 420 aaPredicted RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 ZNF430Q9H8G1 570 aaPredicted RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 RPL8P62917 257 aaKnown RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 ZNF441Q8N8Z8 693 aa10.3□□□□□ -0.76
UBR4-205ENST00000417040 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
UBR4-205ENST00000417040 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms