RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 HSD17B13Q7Z5P4 300 aaPredicted RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 GPR141Q7Z602 305 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 ZNF329Q86UD4 541 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 TMEM17Q86X19 198 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 CMTM1Q8IZ96 169 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 MFSD4AQ8N468 514 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 SAMD12Q8N8I0 201 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 ZNF491Q8N8L2 437 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 C11orf44Q8N8P7 122 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 POC5Q8NA72 575 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 OR6F1Q8NGZ6 308 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 OR4S2Q8NH73 311 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 RAB2BQ8WUD1 216 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 SLC25A38Q96DW6 304 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 HARBI1Q96MB7 349 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 NOL4LQ96MY1 436 aaPredicted RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 SPIN2AQ99865 258 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 SPIN2BQ9BPZ2 258 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 SRSF8Q9BRL6 282 aaKnown RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 IFT46Q9NQC8 304 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 ZNF230Q9UIE0 474 aaPredicted RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 ANAPC10Q9UM13 185 aa5.01□□□□□ -1.61
USP54-202ENST00000413442 RBMX2Q9Y388 322 aaKnown RBP5.01□□□□□ -1.61
USP54-202ENST00000413442 PIGBOS1A0A0B4J2F0 54 aa5□□□□□ -1.61
USP54-202ENST00000413442 LINC01548A6NM66 108 aa5□□□□□ -1.61
USP54-202ENST00000413442 ATP6V0E1O15342 81 aa5□□□□□ -1.61
USP54-202ENST00000413442 SSX5O60225 188 aa5□□□□□ -1.61
USP54-202ENST00000413442 B3GALNT1O75752 331 aa5□□□□□ -1.61
USP54-202ENST00000413442 OR2A4O95047 310 aa5□□□□□ -1.61
USP54-202ENST00000413442 DHFRP00374 187 aa5□□□□□ -1.61
USP54-202ENST00000413442 HPRT1P00492 218 aa5□□□□□ -1.61
USP54-202ENST00000413442 PPYP01298 95 aa5□□□□□ -1.61
USP54-202ENST00000413442 IGKV1-16P04430 117 aa5□□□□□ -1.61
USP54-202ENST00000413442 CLEC2LP0C7M8 214 aa5□□□□□ -1.61
USP54-202ENST00000413442 FCGR2CP31995 323 aa5□□□□□ -1.61
USP54-202ENST00000413442 ECI1P42126 302 aa5□□□□□ -1.61
USP54-202ENST00000413442 RPL5P46777 297 aaKnown RBP5□□□□□ -1.61
USP54-202ENST00000413442 ALDH3B2P48448 385 aa5□□□□□ -1.61
USP54-202ENST00000413442 UCP3P55916 312 aa5□□□□□ -1.61
USP54-202ENST00000413442 ZNF616Q08AN1 781 aa5□□□□□ -1.61
USP54-202ENST00000413442 EGFEM1PQ0D2K5 195 aa5□□□□□ -1.61
USP54-202ENST00000413442 FXYD3Q14802 87 aa5□□□□□ -1.61
USP54-202ENST00000413442 POU2AF1Q16633 256 aa5□□□□□ -1.61
USP54-202ENST00000413442 TMEM95Q3KNT9 176 aa5□□□□□ -1.61
USP54-202ENST00000413442 FBLN7Q53RD9 439 aa5□□□□□ -1.61
USP54-202ENST00000413442 C19orf54Q5BKX5 351 aa5□□□□□ -1.61
USP54-202ENST00000413442 KHDC1LQ5JSQ8 128 aa5□□□□□ -1.61
USP54-202ENST00000413442 C9orf66Q5T8R8 295 aa5□□□□□ -1.61
USP54-202ENST00000413442 UNQ5815/PRO19632Q6UWF5 114 aa5□□□□□ -1.61
USP54-202ENST00000413442 KCTD9Q7L273 389 aa5□□□□□ -1.61
USP54-202ENST00000413442 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
USP54-202ENST00000413442 BVESQ8NE79 360 aa5□□□□□ -1.61
USP54-202ENST00000413442 KLHL30-AS1Q8NEE0 82 aa5□□□□□ -1.61
USP54-202ENST00000413442 OR5H6Q8NGV6 325 aa5□□□□□ -1.61
USP54-202ENST00000413442 ZNF486Q96H40 463 aaPredicted RBP5□□□□□ -1.61
USP54-202ENST00000413442 OR2A7Q96R45 310 aa5□□□□□ -1.61
USP54-202ENST00000413442 HSPB9Q9BQS6 159 aa5□□□□□ -1.61
USP54-202ENST00000413442 DCUN1D5Q9BTE7 237 aa5□□□□□ -1.61
USP54-202ENST00000413442 FBXL15Q9H469 300 aa5□□□□□ -1.61
USP54-202ENST00000413442 PLEKHA2Q9HB19 425 aa5□□□□□ -1.61
USP54-202ENST00000413442 FKBP11Q9NYL4 201 aa5□□□□□ -1.61
USP54-202ENST00000413442 TAS2R8Q9NYW2 309 aa5□□□□□ -1.61
USP54-202ENST00000413442 CACFD1Q9UGQ2 172 aa5□□□□□ -1.61
USP54-202ENST00000413442 IGKV1D-8A0A087WSZ0 117 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 A0A0B4J203 849 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 A0A1W2PN81 502 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 I3L521 148 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 SLC25A17O43808 307 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 NOL3O60936 208 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 ATG12O94817 140 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 IGLV2-23P01705 113 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 HSPB1P04792 205 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 RPLP1P05386 114 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 EGR2P11161 476 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 NQO2P16083 231 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 HIST1H1BP16401 226 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 ZP3P21754 424 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 NFYAP23511 347 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 RCVRNP35243 200 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 CHRNA7P36544 502 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TAS2R31P59538 309 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TAS2R20P59543 309 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 HERV-K104P61576 105 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 VBP1P61758 197 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TSPAN5P62079 268 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 FHL3Q13643 280 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 KIAA0141Q14154 515 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 CTF1Q16619 201 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 PRSS8Q16651 343 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 KLK9Q2XQG4 91 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 GLDNQ6ZMI3 551 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 LCNL1Q6ZST4 164 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 C5orf24Q7Z6I8 188 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 MRPL41Q8IXM3 137 aaKnown RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 ARRDC1Q8N5I2 433 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 TTC9CQ8N5M4 171 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 DRAXINQ8NBI3 349 aaPredicted RBP4.99□□□□□ -1.61
USP54-202ENST00000413442 LFNGQ8NES3 379 aa4.99□□□□□ -1.61
USP54-202ENST00000413442 OR1N2Q8NGR9 330 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms