RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SCOCQ9UIL1 159 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
LSM5-204ENST00000409909 TNCP24821 2201 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 IGLV2-14P01704 120 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 ZNF616Q08AN1 781 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 DEFB121Q5J5C9 76 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 GRPEL2Q8TAA5 225 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 MS4A10Q96PG2 267 aa13.71□□□□□ -0.21
LSM5-204ENST00000409909 A0A087WXM4 84 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 SHOXO15266 292 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 AIREO43918 545 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 CNIH1O95406 144 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 RRASP10301 218 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
LSM5-204ENST00000409909 ZNF645Q8N7E2 425 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 GVQW1Q8N7I0 195 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 SPATA2Q9UM82 520 aa13.7□□□□□ -0.22
LSM5-204ENST00000409909 TUSC2O75896 110 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 CRYZL1O95825 349 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 PTHLHP12272 177 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 LSM3P62310 102 aaKnown RBP13.69□□□□□ -0.22
LSM5-204ENST00000409909 DGCR2P98153 550 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 CBX3Q13185 183 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 TIMM50Q3ZCQ8 353 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 C9orf66Q5T8R8 295 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 PYHIN1Q6K0P9 492 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 OR5T1Q8NG75 326 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
LSM5-204ENST00000409909 A0A0A6YYH2 397 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 A6NJ64 397 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 LGALS1P09382 135 aaKnown RBP13.68□□□□□ -0.22
LSM5-204ENST00000409909 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
LSM5-204ENST00000409909 HOGA1Q86XE5 327 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 BEST4Q8NFU0 473 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 DCUN1D4Q92564 292 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 RHOVQ96L33 236 aa13.68□□□□□ -0.22
LSM5-204ENST00000409909 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
LSM5-204ENST00000409909 IGHV4OR15-8A0A075B7B6 117 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 A0A087WW49 117 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 TMEM127O75204 238 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 SLURP1P55000 103 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 TPPP2P59282 170 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 UBE2KP61086 200 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 EIF4EBP1Q13541 118 aaPredicted RBP13.67□□□□□ -0.22
LSM5-204ENST00000409909 IDO2Q6ZQW0 420 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
LSM5-204ENST00000409909 SLA2Q9H6Q3 261 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
LSM5-204ENST00000409909 LINC01619G3V211 115 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 RAMP3O60896 148 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 FCGR3BO75015 233 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 SLC22A5O76082 557 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 TRGV3P03979 118 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 FCER2P06734 321 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 BRWD1-AS2P59051 145 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 PRSS8Q16651 343 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 VMA21Q3ZAQ7 101 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 OR2B11Q5JQS5 317 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 OVCH2Q7RTZ1 564 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 CROCCP3Q8IVE0 287 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 POC5Q8NA72 575 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 OSR1Q8TAX0 266 aaPredicted RBP13.66□□□□□ -0.22
LSM5-204ENST00000409909 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
LSM5-204ENST00000409909 ZMAT5Q9UDW3 170 aaKnown RBP13.66□□□□□ -0.22
LSM5-204ENST00000409909 MSGN1A6NI15 193 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 OVOL1O14753 267 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 XRCC3O43542 346 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 AADACP22760 399 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 CD40LGP29965 261 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 FCGR2CP31995 323 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 ECI1P42126 302 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 ARPC4P59998 168 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 SNAPC3Q92966 411 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 PRR25Q96S07 402 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 GPHA2Q96T91 129 aa13.65□□□□□ -0.22
LSM5-204ENST00000409909 MEIS3P1A6NDR6 274 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 H3BUA1 57 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
LSM5-204ENST00000409909 SAA1P0DJI8 122 aaPredicted RBP13.64□□□□□ -0.23
LSM5-204ENST00000409909 APELAP0DMC3 54 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 SAMD12Q8N8I0 201 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 S100A16Q96FQ6 103 aaKnown RBP13.64□□□□□ -0.23
LSM5-204ENST00000409909 TMEM68Q96MH6 324 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 HSD17B10Q99714 261 aaKnown RBP13.64□□□□□ -0.23
LSM5-204ENST00000409909 DCUN1D5Q9BTE7 237 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 FUNDC2Q9BWH2 189 aa13.64□□□□□ -0.23
LSM5-204ENST00000409909 ZNF430Q9H8G1 570 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms