RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PRR31Q5SQ13 230 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 MFSD4AQ8N468 514 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 BORCS5Q969J3 196 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 HARBI1Q96MB7 349 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 SOSTQ9BQB4 213 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 METTL1Q9UBP6 276 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 LINC00527Q9UJ94 153 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 ZNF580Q9UK33 172 aa15.65■□□□□ 0.1
PDLIM2-207ENST00000409417 IGHV7-81A0A0B4J1V7 117 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 DPPA5A6NC42 116 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 FABP12A6NFH5 140 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 SHOXO15266 292 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 CRYZL1O95825 349 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 IGLV2-23P01705 113 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 GNRHRP30968 328 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 CD83Q01151 205 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 C10orf99Q6UWK7 81 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 ZNF818PQ6ZRF7 136 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 ZNF329Q86UD4 541 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 TCTEX1D2Q8WW35 142 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 GON7Q9BXV9 100 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 OR51J1Q9H342 316 aa15.64■□□□□ 0.09
PDLIM2-207ENST00000409417 PLXNB1O43157 2135 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 SRRM4A7MD48 611 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 M0QYG6 137 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 FCN1O00602 326 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 SLC25A17O43808 307 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 FCGR3BO75015 233 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 CD3DP04234 171 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 S100A5P33763 92 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 SLC35B1P78383 322 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 C2orf68Q2NKX9 166 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 RNASE10Q5GAN6 216 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 TCTEX1D4Q5JR98 221 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 OR4X2Q8NGF9 303 aa15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 OSR1Q8TAX0 266 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 CITED2Q99967 270 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-207ENST00000409417 TNFSF12O43508 249 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 IFNA6P05013 189 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 CX3CL1P78423 397 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 HIST2H2BDQ6DRA6 164 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 TMEM229BQ8NBD8 167 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 GPHA2Q96T91 129 aa15.62■□□□□ 0.09
PDLIM2-207ENST00000409417 GSTZ1O43708 216 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 CD74P04233 296 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 CRYGBP07316 175 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 BRWD1-AS2P59051 145 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 TAS2R19P59542 299 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 OR2B11Q5JQS5 317 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 FOXB2Q5VYV0 432 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 ZNF562Q6V9R5 426 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 NDUFA11Q86Y39 141 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 ARRDC1Q8N5I2 433 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 COMMD1Q8N668 190 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 OR4S2Q8NH73 311 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 TINAGL1Q9GZM7 467 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 FXYD6Q9H0Q3 95 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 NBEAL1Q6ZS30 2694 aa15.61■□□□□ 0.09
PDLIM2-207ENST00000409417 TET2Q6N021 2002 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 ATP6V0E1O15342 81 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 VDAC1P21796 283 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 KIR2DS2P43631 304 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 UBE2KP61086 200 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 VMA21Q3ZAQ7 101 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 LPCAT3Q6P1A2 487 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 PPP1R27Q86WC6 154 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 CMTM1Q8IZ96 169 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 PARP11Q9NR21 331 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 TPSG1Q9NRR2 321 aa15.6■□□□□ 0.09
PDLIM2-207ENST00000409417 TCRBV4S1A1TA0A5B7 111 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 RBFOX2O43251 390 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 OPN1MWP04001 364 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CSF1P09603 554 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 OPN1MW2P0DN77 364 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 OPN1MW3P0DN78 364 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 NDPQ00604 133 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CFHR3Q02985 330 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CATR1Q13166 79 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 AADACL3Q5VUY0 350 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 TEX38Q6PEX7 206 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 TEX45Q8NA69 505 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CLCC1Q96S66 551 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 FBN3Q75N90 2809 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 ADARB2-AS1A8MUL3 147 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 GPR31O00270 319 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 RAB3DO95716 219 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CA2P00918 260 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 UCP3P55916 312 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 STEAP1BQ6NZ63 245 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 CCDC190Q86UF4 302 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 OR4D10Q8NGI6 311 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 TSSC4Q9Y5U2 329 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 WSB1Q9Y6I7 421 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 V9GYH0 126 aa15.59■□□□□ 0.09
PDLIM2-207ENST00000409417 RAMP3O60896 148 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 PGLYRP1O75594 196 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 CRIP2P52943 208 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 PJVKQ0ZLH3 352 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 MEF2DQ14814 521 aa15.58■□□□□ 0.08
PDLIM2-207ENST00000409417 NSUN5P1Q3KNT7 163 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms