RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 NAT1P18440 290 aa12.98□□□□□ -0.33
LSS-202ENST00000397728 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
LSS-202ENST00000397728 B2MP61769 119 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 TEPPQ6URK8 271 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 OR4A5Q8NH83 315 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 IGKV1-9A0A0C4DH69 117 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 J3KRW8 73 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 S1PR2O95136 353 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 PRB1P04280 392 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 SPCS3P61009 180 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 ZNF90Q03938 601 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 OR1L6Q8NGR2 347 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 ATP5SQ99766 215 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 ATRXP46100 2492 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 CHEK1O14757 476 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 PLAC9Q5JTB6 97 aa12.97□□□□□ -0.33
LSS-202ENST00000397728 DHRS7BQ6IAN0 325 aaPredicted RBP12.97□□□□□ -0.33
LSS-202ENST00000397728 IGKV1D-33P01593 117 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 IGKV1-33P01594 117 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 REG1AP05451 166 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 PAX6P26367 422 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 FGF8P55075 233 aaPredicted RBP12.96□□□□□ -0.33
LSS-202ENST00000397728 RPS11P62280 158 aaKnown RBP eCLIP12.96□□□□□ -0.33
LSS-202ENST00000397728 MIDNQ504T8 468 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 GAB2Q9UQC2 676 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
LSS-202ENST00000397728 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 METRNQ9UJH8 293 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 PF4P02776 101 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 ZNF818PQ6ZRF7 136 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 OR4P4Q8NGL7 312 aa12.96□□□□□ -0.33
LSS-202ENST00000397728 TECRQ9NZ01 308 aaKnown RBP12.96□□□□□ -0.33
LSS-202ENST00000397728 HLA-GP17693 338 aa12.96□□□□□ -0.34
LSS-202ENST00000397728 DSCR9P59020 149 aa12.96□□□□□ -0.34
LSS-202ENST00000397728 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.341e-6■■■■□ 19.4
LSS-202ENST00000397728 RBM14Q96PK6 669 aaKnown RBP12.96□□□□□ -0.34
LSS-202ENST00000397728 FBXL15Q9H469 300 aa12.96□□□□□ -0.34
LSS-202ENST00000397728 U3KQ87 197 aa12.96□□□□□ -0.34
LSS-202ENST00000397728 KIAA2026Q5HYC2 2103 aa12.96□□□□□ -0.34
LSS-202ENST00000397728 ANKHD1Q8IWZ3 2542 aaKnown RBP12.96□□□□□ -0.34
LSS-202ENST00000397728 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 IZUMO4Q1ZYL8 232 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 IGHV3-35A0A0C4DH35 117 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 DBX1A6NMT0 343 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 PROB1E7EW31 1015 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 KBTBD11O94819 623 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 C10orf113Q5VZT2 155 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 RNF2Q99496 336 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 QTRT1Q9BXR0 403 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 PATZ1Q9HBE1 687 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 CBY1Q9Y3M2 126 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 TRIM77I1YAP6 450 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 HSPE1P61604 102 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 OPN4Q9UHM6 478 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 PSG5Q15238 335 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 NCMAPQ5T1S8 102 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 MBNL2Q5VZF2 373 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 CXorf58Q96LI9 332 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 TM2D1Q9BX74 207 aa12.95□□□□□ -0.34
LSS-202ENST00000397728 NXF2Q9GZY0 626 aaKnown RBP12.95□□□□□ -0.34
LSS-202ENST00000397728 CTRB1P17538 263 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 PLPPR1Q8TBJ4 325 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 OR4C12Q96R67 309 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 TRAV40A0A0B4J280 105 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 CORTO00230 105 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 UQCRFS1P47985 274 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 ALX4Q9H161 411 aaPredicted RBP12.94□□□□□ -0.34
LSS-202ENST00000397728 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
LSS-202ENST00000397728 SELLP14151 372 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 PLA2G5P39877 138 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 PAX5Q02548 391 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 CXorf66Q5JRM2 361 aaPredicted RBP12.94□□□□□ -0.34
LSS-202ENST00000397728 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
LSS-202ENST00000397728 ZMAT5Q9UDW3 170 aaKnown RBP12.94□□□□□ -0.34
LSS-202ENST00000397728 HEATR5AQ86XA9 2040 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 NPIPB11E5RHQ5 1161 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 VSIG10L2P0DP72 767 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 RND2P52198 227 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 ERVFC1-1P60608 527 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 CCL1P22362 96 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 TPPP2P59282 170 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 ADIPOQQ15848 244 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 CD24P25063 80 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 OR10J1P30954 320 aa12.93□□□□□ -0.34
LSS-202ENST00000397728 GTF3AQ92664 365 aaKnown RBP12.93□□□□□ -0.34
LSS-202ENST00000397728 PLAUP00749 431 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms