RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A18PA6NE21 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A16PA6NEW6 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A20PA6NIJ5 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A8PA6NJQ4 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 TMEM210A6NLX4 147 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A22PA8MWA6 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A12PA8MX19 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A5PA8MXJ8 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 H3BUT2 72 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
CHL1-202ENST00000397491 CA1P00915 261 aaPredicted RBP12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 SNAI3Q3KNW1 292 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 SPEM1Q8N4L4 309 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 NFAM1Q8NET5 270 aaPredicted RBP12.9□□□□□ -0.34
CHL1-202ENST00000397491 SLC25A40Q8TBP6 338 aa12.9□□□□□ -0.34
CHL1-202ENST00000397491 IL4P05112 153 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 CCL3P10147 92 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 GAB4Q2WGN9 574 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 ZNF324BQ6AW86 544 aaPredicted RBP12.89□□□□□ -0.35
CHL1-202ENST00000397491 MOGAT3Q86VF5 341 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 HBBP68871 147 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 LRRC75BQ2VPJ9 315 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 ATXN7O15265 892 aaPredicted RBP12.89□□□□□ -0.35
CHL1-202ENST00000397491 CLDN14O95500 239 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 OR2H2O95918 312 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 SCGB1A1P11684 91 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 CEACAM1P13688 526 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 C1QL4Q86Z23 238 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 SRSF12Q8WXF0 261 aaKnown RBP12.89□□□□□ -0.35
CHL1-202ENST00000397491 NUDT11Q96G61 164 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
CHL1-202ENST00000397491 ABCA3Q99758 1704 aa12.89□□□□□ -0.35
CHL1-202ENST00000397491 TSPAN2O60636 221 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 ADMP35318 185 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 ASPHD2Q6ICH7 369 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 NPCDR1Q9BY65 106 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 GLRX2Q9NS18 164 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 JKAMPQ9P055 326 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 MARCH11A6NNE9 402 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 ZNHIT1O43257 154 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 C2orf83Q53S99 150 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 WDR54Q9H977 334 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 PCOLCE2Q9UKZ9 415 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 NEUROG3Q9Y4Z2 214 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 MCM3APO60318 1980 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 CCL20P78556 96 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 FAM131CQ96AQ9 280 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 RRHO14718 337 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 LINC00614P0C842 121 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 AREGP15514 252 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 ATP5G3P48201 142 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
CHL1-202ENST00000397491 GTF3AQ92664 365 aaKnown RBP12.88□□□□□ -0.35
CHL1-202ENST00000397491 PILRAQ9UKJ1 303 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
CHL1-202ENST00000397491 M0QZ24 198 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 REG1BP48304 166 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 IL11RAQ14626 422 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 TMEM92Q6UXU6 159 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 C1QL2Q7Z5L3 287 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
CHL1-202ENST00000397491 ALPK2Q86TB3 2170 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 SCO2A0A1W2PP80 73 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 ABHD12Q8N2K0 398 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
CHL1-202ENST00000397491 SPINT1O43278 529 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 SELENOTP62341 195 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
CHL1-202ENST00000397491 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 ZNF414Q96IQ9 312 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 KCNMB1Q16558 191 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 C3AR1Q16581 482 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 DLL3Q9NYJ7 618 aa12.87□□□□□ -0.35
CHL1-202ENST00000397491 PPIAL4DF5H284 164 aa12.86□□□□□ -0.35
CHL1-202ENST00000397491 DNPH1O43598 174 aa12.86□□□□□ -0.35
CHL1-202ENST00000397491 OR4A8P0C604 315 aa12.86□□□□□ -0.35
CHL1-202ENST00000397491 OR4D5Q8NGN0 318 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms