RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ARPC4P59998 168 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 GNB1P62873 340 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
CLTA-203ENST00000396603 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 SCPEP1Q9HB40 452 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 ANXA10Q9UJ72 324 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 ZNF221Q9UK13 617 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 ELF5Q9UKW6 265 aaPredicted RBP12.63□□□□□ -0.39
CLTA-203ENST00000396603 RNF150Q9ULK6 438 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
CLTA-203ENST00000396603 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
CLTA-203ENST00000396603 DYNC2H1Q8NCM8 4307 aaKnown RBP12.63□□□□□ -0.39
CLTA-203ENST00000396603 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 LINC01619G3V211 115 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 SULT1C2O00338 296 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 SSX5O60225 188 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
CLTA-203ENST00000396603 MC5RP33032 325 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 HOGA1Q86XE5 327 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 RDH8Q9NYR8 311 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 OR1A1Q9P1Q5 309 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
CLTA-203ENST00000396603 FOXA2Q9Y261 457 aaPredicted RBP12.62□□□□□ -0.39
CLTA-203ENST00000396603 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
CLTA-203ENST00000396603 LY86O95711 162 aa12.61□□□□□ -0.39
CLTA-203ENST00000396603 LGALS1P09382 135 aaKnown RBP12.61□□□□□ -0.39
CLTA-203ENST00000396603 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
CLTA-203ENST00000396603 IGSF11Q5DX21 431 aa12.61□□□□□ -0.39
CLTA-203ENST00000396603 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.61□□□□□ -0.39
CLTA-203ENST00000396603 DCUN1D4Q92564 292 aa12.61□□□□□ -0.39
CLTA-203ENST00000396603 RITA1Q96K30 269 aa12.61□□□□□ -0.39
CLTA-203ENST00000396603 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
CLTA-203ENST00000396603 RBM38Q9H0Z9 239 aaKnown RBP12.61□□□□□ -0.39
CLTA-203ENST00000396603 IGKV1-6A0A0C4DH72 117 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 RRHO14718 337 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 ST8SIA5O15466 376 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 SAP30O75446 220 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 SLC22A5O76082 557 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 CNTFRP26992 372 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 TAS2R46P59540 309 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
CLTA-203ENST00000396603 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 ACSM6Q6P461 480 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 MCFD2Q8NI22 146 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
CLTA-203ENST00000396603 DGCR14Q96DF8 476 aaKnown RBP12.6□□□□□ -0.39
CLTA-203ENST00000396603 RCHY1Q96PM5 261 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 ASCL2Q99929 193 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 C11orf54Q9H0W9 315 aaPredicted RBP12.6□□□□□ -0.39
CLTA-203ENST00000396603 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
CLTA-203ENST00000396603 A0A1W2PN81 502 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 GP9P14770 177 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 CD40LGP29965 261 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 CHRNA7P36544 502 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 OR3A3P47888 321 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 CX3CL1P78423 397 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 SNX29P2Q8IUI4 249 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
CLTA-203ENST00000396603 OR5AN1Q8NGI8 311 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
CLTA-203ENST00000396603 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
CLTA-203ENST00000396603 ZMAT4Q9H898 229 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 WASHC3Q9Y3C0 194 aa12.59□□□□□ -0.39
CLTA-203ENST00000396603 CTDSP2O14595 271 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 SOX15O60248 233 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 SPDEFO95238 335 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
CLTA-203ENST00000396603 CT45A6P0DMU7 189 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 CT45A5P0DMU8 189 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 CT45A7P0DMV0 189 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 S100A5P33763 92 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 RCVRNP35243 200 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 NDPQ00604 133 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 GVQW1Q8N7I0 195 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 AGMATQ9BSE5 352 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 GAB2Q9UQC2 676 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 OR2W1Q9Y3N9 320 aa12.58□□□□□ -0.4
CLTA-203ENST00000396603 IGKV1D-8A0A087WSZ0 117 aa12.57□□□□□ -0.4
CLTA-203ENST00000396603 A8MZ25 164 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms