RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SLA2Q9H6Q3 261 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 VCX3AQ9NNX9 186 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 RHBDL2Q9NX52 303 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 ETV7Q9Y603 341 aa10.68□□□□□ -0.7
CXCL12-205ENST00000395794 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 SOX15O60248 233 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 SLC22A5O76082 557 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 LGALS1P09382 135 aaKnown RBP10.67□□□□□ -0.7
CXCL12-205ENST00000395794 VMA21Q3ZAQ7 101 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 TIMM50Q3ZCQ8 353 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 TMEM177Q53S58 311 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 DCUN1D5Q9BTE7 237 aa10.67□□□□□ -0.7
CXCL12-205ENST00000395794 ELF5Q9UKW6 265 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-205ENST00000395794 IGKV1D-8A0A087WSZ0 117 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 LINC01619G3V211 115 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 J3QRK9 145 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 OVOL1O14753 267 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 TRGV3P03979 118 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 CNIH2Q6PI25 160 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 NUDCD2Q8WVJ2 157 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 TMEM68Q96MH6 324 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 DIABLOQ9NR28 239 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 TPSG1Q9NRR2 321 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 ANXA10Q9UJ72 324 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 OR2W1Q9Y3N9 320 aa10.66□□□□□ -0.7
CXCL12-205ENST00000395794 TRAV18A0A075B6X5 111 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 A0A0A6YYH2 397 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 A0A0G2JLM5 398 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 C13orf42A0A1B0GVH6 325 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 A6NJ64 397 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 H3BUA1 57 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 ARPC1BO15143 372 aaKnown RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 CREBL2O60519 120 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 TMEM127O75204 238 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 TUSC2O75896 110 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 CRYZL1O95825 349 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 IGHV3-11P01762 117 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 HSPB1P04792 205 aaKnown RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 CLEC2LP0C7M8 214 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 NFYAP23511 347 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 ARPC4P59998 168 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 ZNF429Q86V71 674 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 CROCCP3Q8IVE0 287 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 TEX45Q8NA69 505 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 POC5Q8NA72 575 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 OR5T1Q8NG75 326 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 DCUN1D4Q92564 292 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 PHB2Q99623 299 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 ALX4Q9H161 411 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 RNF167Q9H6Y7 350 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 SCOCQ9UIL1 159 aa10.65□□□□□ -0.7
CXCL12-205ENST00000395794 MRPS7Q9Y2R9 242 aaKnown RBP10.65□□□□□ -0.7
CXCL12-205ENST00000395794 MPPED1O15442 326 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 SAP30O75446 220 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 ACTL6BO94805 426 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 LY86O95711 162 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 IGLV2-23P01705 113 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 HLA-DQB1P01920 261 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 UBE2KP61086 200 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 PJVKQ0ZLH3 352 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 ASPHD1Q5U4P2 390 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 KCTD9Q7L273 389 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
CXCL12-205ENST00000395794 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-205ENST00000395794 IGHV4OR15-8A0A075B7B6 117 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 A0A087WW49 117 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 A0A087WXM4 84 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 FCGR3BO75015 233 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 CRYGBP07316 175 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 SLURP1P55000 103 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 TNXAQ16473 311 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 VAX1Q5SQQ9 334 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 BEST4Q8NFU0 473 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 TSPAN14Q8NG11 270 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 OR5H6Q8NGV6 325 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 ACOT12Q8WYK0 555 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 DDB2Q92466 427 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 DLX4Q92988 240 aaPredicted RBP10.63□□□□□ -0.71
CXCL12-205ENST00000395794 C5orf30Q96GV9 206 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 RHOVQ96L33 236 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 PRR25Q96S07 402 aa10.63□□□□□ -0.71
CXCL12-205ENST00000395794 HSD17B10Q99714 261 aaKnown RBP10.63□□□□□ -0.71
CXCL12-205ENST00000395794 RBMX2Q9Y388 322 aaKnown RBP10.63□□□□□ -0.71
CXCL12-205ENST00000395794 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 SRRM4A7MD48 611 aaKnown RBP10.62□□□□□ -0.71
CXCL12-205ENST00000395794 LINC00473A8K010 186 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 AIREO43918 545 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 SSX5O60225 188 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 TNFAIP8O95379 198 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 ZP3P21754 424 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 AADACP22760 399 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 PRSS8Q16651 343 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 OR4S2Q8NH73 311 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 TCTEX1D2Q8WW35 142 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 SLC25A38Q96DW6 304 aa10.62□□□□□ -0.71
CXCL12-205ENST00000395794 S100A16Q96FQ6 103 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms