RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SLC25A16P16260 332 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 Q6ZRM9 215 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 C8orf31Q8N9H6 132 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 H1FXQ92522 213 aaKnown RBP15.79■□□□□ 0.12
LMNB1-202ENST00000395354 Q96MF0 132 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 RAB40CQ96S21 281 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 LYRM2Q9NU23 88 aaPredicted RBP15.79■□□□□ 0.12
LMNB1-202ENST00000395354 MED13LQ71F56 2210 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 TOR1AO14656 332 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 SSSCA1O60232 199 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 S1PR2O95136 353 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 HPRT1P00492 218 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 ARHGDIBP52566 201 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 ZNF816Q0VGE8 651 aaPredicted RBP15.79■□□□□ 0.12
LMNB1-202ENST00000395354 NCR3LG1Q68D85 454 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 WFDC11Q8NEX6 87 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 MED9Q9NWA0 146 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 FBXL17Q9UF56 701 aa15.79■□□□□ 0.12
LMNB1-202ENST00000395354 MMP23AO75900 390 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 NMBP08949 121 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 THBS3P49746 956 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 RPL39P5Q59GN2 51 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 OR2B11Q5JQS5 317 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 EIF5AL1Q6IS14 154 aaKnown RBP15.78■□□□□ 0.12
LMNB1-202ENST00000395354 ODF3L1Q8IXM7 274 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 LRRC20Q8TCA0 184 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 DDB2Q92466 427 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 LEAP2Q969E1 77 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 FAM210AQ96ND0 272 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 MIOXQ9UGB7 285 aa15.78■□□□□ 0.12
LMNB1-202ENST00000395354 SAA2-SAA4A0A096LPE2 208 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 IGHV4-61A0A0C4DH41 118 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 FAM90A9PA6NNJ1 464 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 CHST1O43916 411 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 SAA2P0DJI9 122 aaPredicted RBP15.77■□□□□ 0.11
LMNB1-202ENST00000395354 DLX6P56179 175 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 TAS2R30P59541 319 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 BAXQ07812 192 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 PDZD9Q8IXQ8 264 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 CLDND2Q8NHS1 167 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 S1PR3Q99500 378 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 ZNF251Q9BRH9 671 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 MAGT1Q9H0U3 335 aa15.77■□□□□ 0.11
LMNB1-202ENST00000395354 PATZ1Q9HBE1 687 aaKnown RBP15.77■□□□□ 0.11
LMNB1-202ENST00000395354 ITPR3Q14573 2671 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 SYNGR2O43760 224 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 KRASP01116 189 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 CCL3L1P16619 93 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 USF1P22415 310 aaPredicted RBP15.76■□□□□ 0.11
LMNB1-202ENST00000395354 G6PCP35575 357 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 RPL23AP62750 156 aaKnown RBP15.76■□□□□ 0.11
LMNB1-202ENST00000395354 EWSR1Q01844 656 aaKnown RBP eCLIP15.76■□□□□ 0.114e-8■■■□□ 17.2
LMNB1-202ENST00000395354 UTF1Q5T230 341 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 ZNF841Q6ZN19 808 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 H2BFWTQ7Z2G1 175 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 LYG1Q8N1E2 194 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 UBAC2Q8NBM4 344 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 ZNF596Q8TC21 504 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 REG4Q9BYZ8 158 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.76■□□□□ 0.11
LMNB1-202ENST00000395354 WSB1Q9Y6I7 421 aa15.76■□□□□ 0.11
LMNB1-202ENST00000395354 A0A087X0M5 115 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 BORCS7-ASMTA0A0B4J1R7 106 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 A0A1B0GX30 115 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 A0A1W2PPH5 198 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 RNF223E7ERA6 249 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 FCGR3BO75015 233 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 MED6O75586 246 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 IGHV3-7P01780 117 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 CAV2P51636 162 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 LMO4P61968 165 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 IZUMO4Q1ZYL8 232 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 MIDNQ504T8 468 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 RPL7L1Q6DKI1 246 aaKnown RBP15.75■□□□□ 0.11
LMNB1-202ENST00000395354 LINC00311Q8N616 119 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 TMEM252Q8N6L7 170 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 OR4S2Q8NH73 311 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 NEIL1Q96FI4 390 aaPredicted RBP15.75■□□□□ 0.11
LMNB1-202ENST00000395354 CREBBPQ92793 2442 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 FAM24AA6NFZ4 105 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 IGHV2-5P01817 119 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 RRASP10301 218 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 GNG10P50151 68 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 PAX9P55771 341 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 OR8B3Q8NGG8 313 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 R3HDM4Q96D70 268 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 SMIM8Q96KF7 97 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 OR8B2Q96RD0 313 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 ARV1Q9H2C2 271 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 HSPB7Q9UBY9 170 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 CACFD1Q9UGQ2 172 aa15.75■□□□□ 0.11
LMNB1-202ENST00000395354 DOCK11Q5JSL3 2073 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 MALRD1Q5VYJ5 2156 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 A0A1W2PPE3 182 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 IGSF23A1L1A6 192 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 MARCH11A6NNE9 402 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 CYSRT1A8MQ03 144 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 LEUTXA8MZ59 168 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 TMEM50AO95807 157 aa15.74■□□□□ 0.11
LMNB1-202ENST00000395354 FAM71F2Q6NXP2 309 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms