RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SH2D1BO14796 132 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 RAMP3O60896 148 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 HIST3H3Q16695 136 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 FAM90A2PQ658T7 463 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 OR4A47Q6IF82 309 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 SSBP4Q9BWG4 385 aaPredicted RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 LIN7CQ9NUP9 197 aaKnown RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 OCIAD1Q9NX40 245 aa7.51□□□□□ -1.21
RTN4-206ENST00000394611 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
RTN4-206ENST00000394611 LOC390937A0A1W2PQ73 354 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 M0QZ24 198 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 SPINT2O43291 252 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 CCL4P13236 92 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 PMELP40967 661 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 FOXG1P55316 489 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 FNDC7Q5VTL7 733 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 PEAR1Q5VY43 1037 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 OR2Y1Q8NGV0 311 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 OR1L1Q8NH94 360 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 ZFHX2Q9C0A1 2572 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 C2CD3Q4AC94 2353 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 RRHO14718 337 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 KBTBD11O94819 623 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 COMPP49747 757 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 GNG4P50150 75 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 PPOXP50336 477 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 C1orf147Q96MC9 270 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 TMEM140Q9NV12 185 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 OR2W1Q9Y3N9 320 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 MUC21A0A0G2JKD1 596 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 MUC21A0A140T8X8 626 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 S1PR2O95136 353 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 CCKARP32238 428 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 MFAP2P55001 183 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 RAB31Q13636 194 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 MUC21Q5SSG8 566 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 LDLRAD2Q5SZI1 272 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 TUSC5Q8IXB3 177 aa7.5□□□□□ -1.21
RTN4-206ENST00000394611 APOBEC3DQ96AK3 386 aaPredicted RBP7.5□□□□□ -1.21
RTN4-206ENST00000394611 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 LYZL6O75951 148 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 PCBD1P61457 104 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 RAB35Q15286 201 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 SLC25A47Q6Q0C1 308 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 PQLC2Q6ZP29 291 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 R3HDM4Q96D70 268 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 RNF2Q99496 336 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 SRXN1Q9BYN0 137 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 TIMM8AO60220 97 aaPredicted RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 GLB1P16278 677 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 GPR12P47775 334 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CCL7P80098 99 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 OR2M3Q8NG83 312 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 NUDT16L1Q9BRJ7 211 aaKnown RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 CTXND1A0A1B0GTU2 59 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CD24P25063 80 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CRYBB3P26998 211 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 EXT1Q16394 746 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 SLC25A45Q8N413 288 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 LPAR2Q9HBW0 351 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 BET1LQ9NYM9 111 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CLDN16Q9Y5I7 305 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 OTOGLQ3ZCN5 2332 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 WNT9BO14905 357 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 NPIPB7O75200 414 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 SRSF10O75494 262 aaKnown RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 USF1P22415 310 aaPredicted RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 TDGF1P3P51864 188 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 PLA2G2CQ5R387 149 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 STUMQ69YW2 141 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 C2orf88Q9BSF0 95 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 HES7Q9BYE0 225 aa7.49□□□□□ -1.21
RTN4-206ENST00000394611 CISD1Q9NZ45 108 aaKnown RBP7.49□□□□□ -1.21
RTN4-206ENST00000394611 A0A0G2JMM0 328 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 SERTM2A0A1B0GWG4 89 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 A0A1W2PPB8 328 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 A0A1W2PRS3 328 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 LNP1A1A4G5 178 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 KIR3DP1A8MWS1 328 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 ENSAO43768 121 aaKnown RBP7.48□□□□□ -1.21
RTN4-206ENST00000394611 SSTR5P35346 364 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 FOLR3P41439 243 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 TMEM116Q8NCL8 245 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 RND1Q92730 232 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 GALMQ96C23 342 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 C18orf12Q96KH6 178 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 DSPP15924 2871 aaKnown RBP7.48□□□□□ -1.21
RTN4-206ENST00000394611 TMSB15BA0A087X1C1 80 aa7.48□□□□□ -1.21
RTN4-206ENST00000394611 MARCH11A6NNE9 402 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms