RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 NDUFB4O95168 129 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 CD55P08174 381 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 CTXN2P0C2S0 81 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 KIAA1644Q3SXP7 199 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 TIGITQ495A1 244 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 TMEM256Q8N2U0 113 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 WDR61Q9GZS3 305 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 GAL3ST2Q9H3Q3 398 aa16.09■□□□□ 0.17
PPFIA1-202ENST00000389547 IGKV1D-8A0A087WSZ0 117 aa16.08■□□□□ 0.17
PPFIA1-202ENST00000389547 NGFP01138 241 aa16.08■□□□□ 0.17
PPFIA1-202ENST00000389547 FOXG1P55316 489 aaPredicted RBP16.08■□□□□ 0.17
PPFIA1-202ENST00000389547 GTF2H5Q6ZYL4 71 aa16.08■□□□□ 0.17
PPFIA1-202ENST00000389547 OR6C3Q9NZP0 311 aa16.08■□□□□ 0.17
PPFIA1-202ENST00000389547 SPINK9Q5DT21 86 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 OR8G5Q8NG78 346 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 TMEM222Q9H0R3 208 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 CEP192Q8TEP8 1941 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 LYL1P12980 280 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 CYP2G1PQ6ZSU1 146 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 MRGPRFQ96AM1 343 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 GMPPAQ96IJ6 420 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 PPIAL4AQ9Y536 164 aa16.08■□□□□ 0.16
PPFIA1-202ENST00000389547 RNF144BQ7Z419 303 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 CALHM1Q8IU99 346 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 TGIF2LYQ8IUE0 185 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 BRS3P32247 399 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 TNFSF4P23510 183 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 LHX2P50458 406 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 MRPL54Q6P161 138 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 FAM234AQ9H0X4 552 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 ZFP30Q9Y2G7 519 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 LAMTOR2Q9Y2Q5 125 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 WNK2Q9Y3S1 2297 aa16.07■□□□□ 0.16
PPFIA1-202ENST00000389547 TCF23Q7RTU1 214 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 ASCL5Q7RTU5 278 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 ATP23Q9Y6H3 246 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 C10orf142B7Z368 130 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 SPRY3O43610 288 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 CA11O75493 328 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 USF1P22415 310 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 RPL23P62829 140 aaKnown RBP16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 SERF2P84101 59 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 Q5PR19 223 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 RIPPLY2Q5TAB7 128 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 KIAA2026Q5HYC2 2103 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 CTXND1A0A1B0GTU2 59 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 KLF3P57682 345 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 MRPL18Q9H0U6 180 aaKnown RBP16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 PLCE1Q9P212 2302 aa16.06■□□□□ 0.16
PPFIA1-202ENST00000389547 FAM87AP0C7U9 286 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 CLDN18P56856 261 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 GNG3P63215 75 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 ZNF816Q0VGE8 651 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 LDLRAD2Q5SZI1 272 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 ZIC4Q8N9L1 334 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 ABHD17AQ96GS6 310 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 NUDT16L1Q9BRJ7 211 aaKnown RBP16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 WNT5BQ9H1J7 359 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 TMEM131Q92545 1883 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 DOCK11Q5JSL3 2073 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 M0R1X1 148 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 CATR1Q13166 79 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 OR2Z1Q8NG97 314 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 OR4C12Q96R67 309 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 PLA2G2EQ9NZK7 142 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 ZNF319Q9P2F9 582 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 POLR3KQ9Y2Y1 108 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 GGNQ86UU5 652 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 GBGT1Q8N5D6 347 aa16.05■□□□□ 0.16
PPFIA1-202ENST00000389547 A0A1W2PNU3 283 aaPredicted RBP16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 FAM90A27PA6NNH2 459 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 RPL24P83731 157 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 H2BFWTQ7Z2G1 175 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 LHFPL1Q86WI0 220 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 PRSS33Q8NF86 280 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 MOB3AQ96BX8 217 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 CHD3Q12873 2000 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 OR8B8Q15620 311 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 C10orf128Q5T292 105 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 PROK2Q9HC23 129 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 NGBQ9NPG2 151 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 PPP1R35Q8TAP8 253 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 TMEM54Q969K7 222 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 ZNF488Q96MN9 340 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 ZNF716A6NP11 495 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 UNQ5815/PRO19632Q6UWF5 114 aa16.04■□□□□ 0.16
PPFIA1-202ENST00000389547 M0R2Z0 102 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 DLL1O00548 723 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 SERF1AO75920 110 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 VWA1Q6PCB0 445 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 SPSB3Q6PJ21 355 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 PSG2P11465 335 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 RPEL1Q2QD12 228 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 SLC25A40Q8TBP6 338 aa16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 LIN7CQ9NUP9 197 aaKnown RBP16.03■□□□□ 0.16
PPFIA1-202ENST00000389547 GNG12Q9UBI6 72 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms