RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 TMEM68Q96MH6 324 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 CITED4Q96RK1 184 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 TINAGL1Q9GZM7 467 aaPredicted RBP12.88□□□□□ -0.35
SMN2-201ENST00000380741 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
SMN2-201ENST00000380741 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
SMN2-201ENST00000380741 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 A8MZ25 164 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 MFNGO00587 321 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 BRI3O95415 125 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 DIRAS3O95661 229 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 TRBV12-3P01733 135 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
SMN2-201ENST00000380741 CBX3Q13185 183 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 DYRK1AQ13627 763 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 RTL8BQ17RB0 113 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 SGPP2Q8IWX5 399 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 OR10R2Q8NGX6 335 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 COA4Q9NYJ1 87 aa12.87□□□□□ -0.35
SMN2-201ENST00000380741 RAB27BO00194 218 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 RBMXL2O75526 392 aaKnown RBP12.86□□□□□ -0.35
SMN2-201ENST00000380741 HIST1H1DP16402 221 aaKnown RBP12.86□□□□□ -0.35
SMN2-201ENST00000380741 AADACP22760 399 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 GADD45AP24522 165 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 SSX1Q16384 188 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 DDB2Q92466 427 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 PHB2Q99623 299 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 GINS4Q9BRT9 223 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
SMN2-201ENST00000380741 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
SMN2-201ENST00000380741 RBM7Q9Y580 266 aaKnown RBP12.86□□□□□ -0.35
SMN2-201ENST00000380741 A0A0B4J203 849 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 PDCD5O14737 125 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 RRASP10301 218 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
SMN2-201ENST00000380741 UBE2KP61086 200 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
SMN2-201ENST00000380741 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
SMN2-201ENST00000380741 GAR1Q9NY12 217 aaKnown RBP12.85□□□□□ -0.35
SMN2-201ENST00000380741 IGKV1D-8A0A087WSZ0 117 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 LINC00473A8K010 186 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 H0Y980 276 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 CRYZL1O95825 349 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 CSN3P07498 182 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 RAB6AP20340 208 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 TNXAQ16473 311 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 PRSS8Q16651 343 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 VMA21Q3ZAQ7 101 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
SMN2-201ENST00000380741 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 ADAD2Q8NCV1 583 aaKnown RBP12.84□□□□□ -0.35
SMN2-201ENST00000380741 SRSF12Q8WXF0 261 aaKnown RBP12.84□□□□□ -0.35
SMN2-201ENST00000380741 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 THAP7Q9BT49 309 aaPredicted RBP12.84□□□□□ -0.35
SMN2-201ENST00000380741 EDA2RQ9HAV5 297 aa12.84□□□□□ -0.35
SMN2-201ENST00000380741 OR9G9P0C7N8 305 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 MYL9P24844 172 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 RPEL1Q2QD12 228 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 Q6ZS49 121 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 ACOT12Q8WYK0 555 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 NDUFB11Q9NX14 153 aa12.83□□□□□ -0.36
SMN2-201ENST00000380741 ELF5Q9UKW6 265 aaPredicted RBP12.83□□□□□ -0.36
SMN2-201ENST00000380741 METTL21EPA6NDL7 271 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 MPPED1O15442 326 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 PRH1P02810 166 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 RAB3BP20337 219 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 TALDO1P37837 337 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 TATDN3Q17R31 274 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 OSR1Q8TAX0 266 aaPredicted RBP12.82□□□□□ -0.36
SMN2-201ENST00000380741 ISOC1Q96CN7 298 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 SIGLEC8Q9NYZ4 499 aa12.82□□□□□ -0.36
SMN2-201ENST00000380741 TRDV1A0A1B0GX56 115 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 J3QRK9 145 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 OR2A4O95047 310 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
SMN2-201ENST00000380741 RHOGP84095 191 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 ZNF45Q02386 682 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 HAGHQ16775 308 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 Q8N402 240 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 SNAPC3Q92966 411 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 SPATA25Q9BR10 227 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 CENPOQ9BU64 300 aa12.81□□□□□ -0.36
SMN2-201ENST00000380741 ATG5Q9H1Y0 275 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms