RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MAFIPQ8WZ33 124 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 HARBI1Q96MB7 349 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 ELOVL1Q9BW60 279 aa16.19■□□□□ 0.18
VSX1-201ENST00000376707 RBM7Q9Y580 266 aaKnown RBP16.19■□□□□ 0.18
VSX1-201ENST00000376707 H3BUA1 57 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 TALDO1P37837 337 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 TAGLNQ01995 201 aaKnown RBP16.18■□□□□ 0.18
VSX1-201ENST00000376707 PJVKQ0ZLH3 352 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 OVCH2Q7RTZ1 564 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 SBSPONQ8IVN8 264 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 C5orf30Q96GV9 206 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 GINS4Q9BRT9 223 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 SSR3Q9UNL2 185 aa16.18■□□□□ 0.18
VSX1-201ENST00000376707 IGKV1D-8A0A087WSZ0 117 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 A0A0G2JLM5 398 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 SHOXO15266 292 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 IGLV2-23P01705 113 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 RTL8BQ17RB0 113 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 CDNFQ49AH0 187 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 HACD4Q5VWC8 232 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 H1FOOQ8IZA3 346 aaPredicted RBP16.17■□□□□ 0.18
VSX1-201ENST00000376707 BVESQ8NE79 360 aa16.17■□□□□ 0.18
VSX1-201ENST00000376707 RANGRFQ9HD47 186 aaPredicted RBP16.17■□□□□ 0.18
VSX1-201ENST00000376707 ELF5Q9UKW6 265 aaPredicted RBP16.17■□□□□ 0.18
VSX1-201ENST00000376707 C3orf84H3BNL1 204 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 SCGNO76038 276 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 CRYGBP07316 175 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 FRMD6-AS1P0C7T7 363 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 ZP3P21754 424 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 SSBP2P81877 361 aaPredicted RBP16.16■□□□□ 0.18
VSX1-201ENST00000376707 SFXN4Q6P4A7 337 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 TMEM68Q96MH6 324 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 RSRP1Q9BUV0 290 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 OR51E2Q9H255 320 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 DAPK2Q9UIK4 370 aa16.16■□□□□ 0.18
VSX1-201ENST00000376707 ANKRD34BA5PLL1 514 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 TRIM64CA6NLI5 447 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 RRASP10301 218 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 TMEM177Q53S58 311 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 HAPLN4Q86UW8 402 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 ANKRD13BQ86YJ7 626 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 RCHY1Q96PM5 261 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 DCSTAMPQ9H295 470 aa16.15■□□□□ 0.18
VSX1-201ENST00000376707 RRP15Q9Y3B9 282 aaKnown RBP16.15■□□□□ 0.18
VSX1-201ENST00000376707 SORL1Q92673 2214 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 SDC2P34741 201 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 SCAND1P57086 179 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 KCTD21Q4G0X4 260 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 DDB2Q92466 427 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 ADTRPQ96IZ2 230 aa16.14■□□□□ 0.17
VSX1-201ENST00000376707 RYR3Q15413 4870 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 SRRM4A7MD48 611 aaKnown RBP16.13■□□□□ 0.17
VSX1-201ENST00000376707 CTXN2P0C2S0 81 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 AADACP22760 399 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 DUTP33316 252 aaKnown RBP16.13■□□□□ 0.17
VSX1-201ENST00000376707 VMA21Q3ZAQ7 101 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 LGALS14Q8TCE9 139 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 PHB2Q99623 299 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 ZMAT4Q9H898 229 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 COA4Q9NYJ1 87 aa16.13■□□□□ 0.17
VSX1-201ENST00000376707 TMEM235A6NFC5 223 aa16.12■□□□□ 0.17
VSX1-201ENST00000376707 IGLV1-51P01701 117 aa16.12■□□□□ 0.17
VSX1-201ENST00000376707 ST6GALNAC5Q9BVH7 336 aa16.12■□□□□ 0.17
VSX1-201ENST00000376707 TINAGL1Q9GZM7 467 aaPredicted RBP16.12■□□□□ 0.17
VSX1-201ENST00000376707 RHBDL2Q9NX52 303 aa16.12■□□□□ 0.17
VSX1-201ENST00000376707 STAB2Q8WWQ8 2551 aa16.12■□□□□ 0.17
VSX1-201ENST00000376707 MSGN1A6NI15 193 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 BRI3O95415 125 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 CRYZL1O95825 349 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 APELAP0DMC3 54 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 UBE2KP61086 200 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 DEFA5Q01523 94 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 TNXAQ16473 311 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 TEX45Q8NA69 505 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 NUDCD2Q8WVJ2 157 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 OR2W1Q9Y3N9 320 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 ETV7Q9Y603 341 aa16.11■□□□□ 0.17
VSX1-201ENST00000376707 LINC00473A8K010 186 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 MPPED1O15442 326 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 SSX5O60225 188 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 HLA-DQB1P01920 261 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 CLEC2LP0C7M8 214 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 CD36P16671 472 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 GNG2P59768 71 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 MXD1Q05195 221 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 KLF5Q13887 457 aaPredicted RBP16.1■□□□□ 0.17
VSX1-201ENST00000376707 NEDD8Q15843 81 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 PRSS8Q16651 343 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 MRGPRG-AS1Q2M3A8 158 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 CNIH2Q6PI25 160 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 IDO2Q6ZQW0 420 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 ZNF645Q8N7E2 425 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 OR9G4Q8NGQ1 327 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 MUC7Q8TAX7 377 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 ACOT12Q8WYK0 555 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 USMG5Q96IX5 58 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 RNF167Q9H6Y7 350 aa16.1■□□□□ 0.17
VSX1-201ENST00000376707 PEF1Q9UBV8 284 aaKnown RBP16.1■□□□□ 0.17
VSX1-201ENST00000376707 LOC100506127A0A0U1RQW1 187 aa16.09■□□□□ 0.17
VSX1-201ENST00000376707 J3QRK9 145 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 516.3 ms