RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMEM203Q969S6 136 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 KCNK7Q9Y2U2 307 aa10.43□□□□□ -0.74
CXCL12-202ENST00000374426 AK6Q9Y3D8 172 aaKnown RBP10.43□□□□□ -0.74
CXCL12-202ENST00000374426 A0A0B4J203 849 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 ZNF785A8K8V0 405 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 CD7P09564 240 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 OR9G9P0C7N8 305 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 CLDN12P56749 244 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 PLA2G7Q13093 441 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 RAB11BQ15907 218 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 PRSS8Q16651 343 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 RTL8BQ17RB0 113 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 LIPKQ5VXJ0 399 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 TMEM91Q6ZNR0 172 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 IDO2Q6ZQW0 420 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 PHB2Q99623 299 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 CABLES2Q9BTV7 478 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 AKIP1Q9NQ31 210 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 PEMTQ9UBM1 199 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 ZNF230Q9UIE0 474 aaPredicted RBP10.42□□□□□ -0.74
CXCL12-202ENST00000374426 FRAS1Q86XX4 4008 aa10.42□□□□□ -0.74
CXCL12-202ENST00000374426 TRBV6-7A0A0A0MS04 114 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 TRBV9A0A0B4J1U6 114 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 PTGES3LE9PB15 166 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 AIREO43918 545 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 TPPPO94811 219 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 PRH1P02810 166 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 FCGR3AP08637 254 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 UBE2KP61086 200 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 RHOGP84095 191 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 TAGLNQ01995 201 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 ZNF45Q02386 682 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 CBX3Q13185 183 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 EXOSC2Q13868 293 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 MED22Q15528 200 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 TNXAQ16473 311 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 LAX1Q8IWV1 398 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 TEX45Q8NA69 505 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 OR10J5Q8NHC4 309 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
CXCL12-202ENST00000374426 DDB2Q92466 427 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
CXCL12-202ENST00000374426 FAM223BA6NKX1 122 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 RRASP10301 218 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 RPS25P62851 125 aaKnown RBP10.4□□□□□ -0.74
CXCL12-202ENST00000374426 IRF3Q14653 427 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 RCN1Q15293 331 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 C2orf76Q3KRA6 126 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 VMA21Q3ZAQ7 101 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 FAM223AQ8IWN6 122 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 UFD1Q92890 307 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 SLC2A8Q9NY64 477 aa10.4□□□□□ -0.74
CXCL12-202ENST00000374426 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.39□□□□□ -0.75
CXCL12-202ENST00000374426 TMEM272A0A1B0GTI8 110 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 LINC00473A8K010 186 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 MPPED1O15442 326 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 DENRO43583 198 aaKnown RBP10.39□□□□□ -0.75
CXCL12-202ENST00000374426 DIRAS3O95661 229 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 CRYZL1O95825 349 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 EDN2P20800 178 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
CXCL12-202ENST00000374426 ATP5G2Q06055 141 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 OGFRL1Q5TC84 451 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-202ENST00000374426 ACOT12Q8WYK0 555 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 MAFIPQ8WZ33 124 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 RAB3CQ96E17 227 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 ZNF430Q9H8G1 570 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-202ENST00000374426 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 ZC4H2Q9NQZ6 224 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 DMRT1Q9Y5R6 373 aa10.39□□□□□ -0.75
CXCL12-202ENST00000374426 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 TUSC2O75896 110 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 ARL6IP5O75915 188 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
CXCL12-202ENST00000374426 TPBGQ13641 420 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 NECAP1Q8NC96 275 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 OSR1Q8TAX0 266 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-202ENST00000374426 DYNLRB2Q8TF09 96 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
CXCL12-202ENST00000374426 RBM7Q9Y580 266 aaKnown RBP10.38□□□□□ -0.75
CXCL12-202ENST00000374426 C2orf70A6NJV1 201 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 PPP5D1E7EU14 171 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 EBAG9O00559 213 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 MFNGO00587 321 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 CASQ2O14958 399 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 HLA-AP01891 365 aaKnown RBP10.37□□□□□ -0.75
CXCL12-202ENST00000374426 HSMCR30P0CW71 290 aa10.37□□□□□ -0.75
CXCL12-202ENST00000374426 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms