RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 GAGE1Q13065 139 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 VWC2Q2TAL6 325 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 PRAMEF6Q5VXH4 476 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 WDR82Q6UXN9 313 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 WDR31Q8NA23 367 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 ZDHHC16Q969W1 377 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 MISP3Q96FF7 219 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 TAAR6Q96RI8 345 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 SLC25A22Q9H936 323 aa14.76□□□□□ -0.05
GYPC-202ENST00000356887 TMEM250H0YL14 139 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 HMGB3O15347 200 aaKnown RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 IGKV3-15P01624 115 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 FFAR4Q5NUL3 377 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 NCR3LG1Q68D85 454 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 ZNF66Q6ZN08 573 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 H2BFWTQ7Z2G1 175 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 OR10D4PQ8NGN7 298 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 RHOVQ96L33 236 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 CIB3Q96Q77 187 aaPredicted RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 TRIB1Q96RU8 372 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 OPN3Q9H1Y3 402 aaPredicted RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 METRNQ9UJH8 293 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 CHTOPQ9Y3Y2 248 aaKnown RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 OR5H1A6NKK0 313 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 IFNL4K9M1U5 179 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 IGHG3P01860 377 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 PFN1P07737 140 aaKnown RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 MDKP21741 143 aaPredicted RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 COL10A1Q03692 680 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 TFF3Q07654 80 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 ADIRFQ15847 76 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 C16orf82Q7Z2V1 217 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 OR13A1Q8NGR1 328 aa14.75□□□□□ -0.05
GYPC-202ENST00000356887 ACTR3CQ9C0K3 210 aaPredicted RBP14.75□□□□□ -0.05
GYPC-202ENST00000356887 DIDO1Q9BTC0 2240 aaKnown RBP14.74□□□□□ -0.05
GYPC-202ENST00000356887 LINC00473A8K010 186 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 DLL1O00548 723 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 KITLGP21583 273 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 RPL23P62829 140 aaKnown RBP14.74□□□□□ -0.05
GYPC-202ENST00000356887 GNB2P62879 340 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 PYGO2Q9BRQ0 406 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 MANBALQ9NQG1 85 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 LAMP3Q9UQV4 416 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 USF3Q68DE3 2245 aa14.74□□□□□ -0.05
GYPC-202ENST00000356887 SPAARA0A1B0GVQ0 90 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 RD3LP0DJH9 198 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 COX5AP20674 150 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 SSTR5P35346 364 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 LINC00205P59089 165 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 RPS16P62249 146 aaKnown RBP14.73□□□□□ -0.05
GYPC-202ENST00000356887 BSXQ3C1V8 233 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 CDPF1Q6NVV7 123 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 GATAD1Q8WUU5 269 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 S100PBPQ96BU1 408 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 HSD17B10Q99714 261 aaKnown RBP14.73□□□□□ -0.05
GYPC-202ENST00000356887 NPCDR1Q9BY65 106 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 ZFHX2Q9C0A1 2572 aaPredicted RBP14.73□□□□□ -0.05
GYPC-202ENST00000356887 IGHV3-43A0A0B4J1X8 118 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 IGHV3-43DP0DP04 118 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 KIR2DL2P43627 348 aaPredicted RBP14.73□□□□□ -0.05
GYPC-202ENST00000356887 C4orf17Q53FE4 359 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 TPRX1Q8N7U7 411 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 CNEP1R1Q8N9A8 125 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 OR10A7Q8NGE5 316 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 RPUSD4Q96CM3 377 aaKnown RBP14.73□□□□□ -0.05
GYPC-202ENST00000356887 ZNF292O60281 2723 aa14.73□□□□□ -0.05
GYPC-202ENST00000356887 TIMM8AO60220 97 aaPredicted RBP14.72□□□□□ -0.05
GYPC-202ENST00000356887 WISP2O76076 250 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 FTH1P19P0C7X4 201 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 TUBG1P23258 451 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 PDZD11Q5EBL8 140 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 RFESDQ8TAC1 157 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 PARLQ9H300 379 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 SRD5A3Q9H8P0 318 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 TUBG2Q9NRH3 451 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 WASF3Q9UPY6 502 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 PSG11Q9UQ72 335 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 GAB2Q9UQC2 676 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 C15orf65H3BRN8 121 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 RPP30P78346 268 aaKnown RBP14.72□□□□□ -0.05
GYPC-202ENST00000356887 TLE1Q04724 770 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 SMIM21Q3B7S5 101 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 SPINK9Q5DT21 86 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 ZNF709Q8N972 641 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 C1orf162Q8NEQ5 155 aaPredicted RBP14.72□□□□□ -0.05
GYPC-202ENST00000356887 OR4F5Q8NH21 305 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 OR4F4Q96R69 305 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 MSL2Q9HCI7 577 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 FZR1Q9UM11 496 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 DMXL1Q9Y485 3027 aa14.72□□□□□ -0.05
GYPC-202ENST00000356887 CNOT1A5YKK6 2376 aaKnown RBP14.72□□□□□ -0.05
GYPC-202ENST00000356887 DEFB108AA8MXU0 73 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 CECR9P0C854 216 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 HOXC12P31275 282 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 FABP6P51161 128 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 HTD2P86397 168 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 FOXF2Q12947 444 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 VWA1Q6PCB0 445 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 ASCL5Q7RTU5 278 aa14.71□□□□□ -0.05
GYPC-202ENST00000356887 CD177Q8N6Q3 437 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms