RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 APOA2P02652 100 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 IGKV1D-39P04432 117 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 LPAR6P43657 344 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 SRPXP78539 464 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 FAM120AOSQ5T036 256 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 C9orf139Q6ZV77 190 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 COQ8AQ8NI60 647 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 RBMXL1Q96E39 390 aaKnown RBP21.79■■□□□ 1.08
SSBP4-202ENST00000348495 WASHC3Q9Y3C0 194 aa21.79■■□□□ 1.08
SSBP4-202ENST00000348495 IGHV3-72A0A0B4J1Y9 119 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 DBX1A6NMT0 343 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 LY6G6DO95868 133 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 IGKV1-16P04430 117 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 RRASP10301 218 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 RPA2P15927 270 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 RTL8BQ17RB0 113 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 DHRS7BQ6IAN0 325 aaPredicted RBP21.78■■□□□ 1.08
SSBP4-202ENST00000348495 LIN54Q6MZP7 749 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 PDPNQ86YL7 162 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 LGI3Q8N145 548 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 OR4S2Q8NH73 311 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 IL22RA2Q969J5 263 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 MEGF9Q9H1U4 602 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 PLEKHA2Q9HB19 425 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 HIVEP1P15822 2718 aa21.78■■□□□ 1.08
SSBP4-202ENST00000348495 RAB13P51153 203 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 SELENOHQ8IZQ5 122 aaKnown RBP21.77■■□□□ 1.08
SSBP4-202ENST00000348495 S1PR2O95136 353 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 HPRT1P00492 218 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 CD1BP29016 333 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 CADM3Q8N126 398 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 TMEM160Q9NX00 188 aa21.77■■□□□ 1.08
SSBP4-202ENST00000348495 hCG_2014768A0A024R1R8 64 aa21.76■■□□□ 1.07
SSBP4-202ENST00000348495 SSNA1O43805 119 aa21.76■■□□□ 1.07
SSBP4-202ENST00000348495 CRYZL1O95825 349 aa21.76■■□□□ 1.07
SSBP4-202ENST00000348495 TMEM268Q5VZI3 342 aa21.76■■□□□ 1.07
SSBP4-202ENST00000348495 RBPMSQ93062 196 aaKnown RBP21.76■■□□□ 1.07
SSBP4-202ENST00000348495 FAM90A9PA6NNJ1 464 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 H7C2Y5 167 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 VENTXO95231 258 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 ZNF695Q8IW36 515 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 FAM96BQ9Y3D0 163 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 VGLL3A8MV65 326 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 TMEM177Q53S58 311 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 BCL6BQ8N143 479 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-202ENST00000348495 SLC35G3Q8N808 338 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 OR4C13Q8NGP0 309 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 MS4A7Q9GZW8 240 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-202ENST00000348495 COMMD9Q9P000 198 aa21.75■■□□□ 1.07
SSBP4-202ENST00000348495 FBP1P09467 338 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 DYNLT3P51808 116 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 ARHGDIBP52566 201 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 RRAS2P62070 204 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-202ENST00000348495 C2orf68Q2NKX9 166 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 LYZL2Q7Z4W2 148 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 UXS1Q8NBZ7 420 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 FLYWCH2Q96CP2 140 aaKnown RBP21.74■■□□□ 1.07
SSBP4-202ENST00000348495 MED28Q9H204 178 aa21.74■■□□□ 1.07
SSBP4-202ENST00000348495 SONP18583 2426 aaKnown RBP21.73■■□□□ 1.07
SSBP4-202ENST00000348495 OSR1Q8TAX0 266 aaPredicted RBP21.73■■□□□ 1.07
SSBP4-202ENST00000348495 SEC22AQ96IW7 307 aa21.73■■□□□ 1.07
SSBP4-202ENST00000348495 PIGBOS1A0A0B4J2F0 54 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 DUXBA0A1W2PPF3 345 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 IGKV1-5P01602 117 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 HLA-GP17693 338 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 EBI3Q14213 229 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 IL17RELQ6ZVW7 336 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 RITA1Q96K30 269 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 RAB18Q9NP72 206 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 NAV3Q8IVL0 2385 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 ADAP1O75689 374 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 SULT1A3P0DMM9 295 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 SULT1A4P0DMN0 295 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 BRS3P32247 399 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 FCN2Q15485 313 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 POU2AF1Q16633 256 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 THNSL2Q86YJ6 484 aa21.72■■□□□ 1.07
SSBP4-202ENST00000348495 SRRM4A7MD48 611 aaKnown RBP21.71■■□□□ 1.07
SSBP4-202ENST00000348495 IGKV1D-33P01593 117 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 IGKV1-33P01594 117 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 SNRNP70P08621 437 aaKnown RBP21.71■■□□□ 1.07
SSBP4-202ENST00000348495 P0C879 139 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 NQO2P16083 231 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 CD24P25063 80 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 TUSC1Q2TAM9 212 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 DEFB112Q30KQ8 113 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 FBLN7Q53RD9 439 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 PIFOQ8TCI5 191 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 C22orf15Q8WYQ4 148 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 R3HDM4Q96D70 268 aa21.71■■□□□ 1.07
SSBP4-202ENST00000348495 KRASP01116 189 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 HOXB5P09067 269 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 VDAC1P21796 283 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 G6PCP35575 357 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 AANATQ16613 207 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 OR11H7Q8NGC8 314 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 LSM10Q969L4 123 aaKnown RBP21.7■■□□□ 1.06
SSBP4-202ENST00000348495 RNF5Q99942 180 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 TMED3Q9Y3Q3 217 aa21.7■■□□□ 1.06
SSBP4-202ENST00000348495 MARCH11A6NNE9 402 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms