RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PMP2P02689 132 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 ELANEP08246 267 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 NAT1P18440 290 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 SLC6A1P30531 599 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 RPL23AP62750 156 aaKnown RBP15.09■□□□□ 0.01
SYNE4-202ENST00000340477 TMEM267Q0VDI3 215 aaPredicted RBP15.09■□□□□ 0.01
SYNE4-202ENST00000340477 CATR1Q13166 79 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 DYRK1AQ13627 763 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 ECSCRQ19T08 205 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 ACTBL2Q562R1 376 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 ZNF66Q6ZN08 573 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 TMEM17Q86X19 198 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 OR4S2Q8NH73 311 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 DYNC2LI1Q8TCX1 351 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 DDB2Q92466 427 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 TAS2R8Q9NYW2 309 aa15.09■□□□□ 0.01
SYNE4-202ENST00000340477 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 FCGR3BO75015 233 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 CNIH1O95406 144 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 CA2P00918 260 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 HLA-DMAP28067 261 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 HRH1P35367 487 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 KIR2DS2P43631 304 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 RFX2P48378 723 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 TSPAN5P62079 268 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 CX3CL1P78423 397 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 TMEM65Q6PI78 240 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 OVCH2Q7RTZ1 564 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 PPP1R27Q86WC6 154 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 TCTEX1D1Q8N7M0 179 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 ZNF2Q9BSG1 426 aaPredicted RBP15.08■□□□□ 0
SYNE4-202ENST00000340477 C6orf62Q9GZU0 229 aaPredicted RBP15.08■□□□□ 0
SYNE4-202ENST00000340477 RABL2AQ9UBK7 228 aaPredicted RBP15.08■□□□□ 0
SYNE4-202ENST00000340477 RABL2BQ9UNT1 228 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 WSB1Q9Y6I7 421 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 A3GALT2U3KPV4 340 aa15.08■□□□□ 0
SYNE4-202ENST00000340477 VWFP04275 2813 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 IGHG4P01861 327 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 GNB1P62873 340 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 RNASE12Q5GAN4 147 aaKnown RBP15.07■□□□□ 0
SYNE4-202ENST00000340477 OR2B11Q5JQS5 317 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 ZNF562Q6V9R5 426 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 LAX1Q8IWV1 398 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 KLHL30-AS1Q8NEE0 82 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 OR6F1Q8NGZ6 308 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 ARPC1AQ92747 370 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 CCL28Q9NRJ3 127 aa15.07■□□□□ 0
SYNE4-202ENST00000340477 TNFSF12O43508 249 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 IGLV2-14P01704 120 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 CD40LGP29965 261 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 UBE2KP61086 200 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 MRPS10P82664 201 aaKnown RBP15.06■□□□□ 0
SYNE4-202ENST00000340477 CFHR3Q02985 330 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 MFSD4AQ8N468 514 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 POC5Q8NA72 575 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 FCAMRQ8WWV6 532 aa15.06■□□□□ 0
SYNE4-202ENST00000340477 G3V318 75 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 FCN1O00602 326 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 ACTL6BO94805 426 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 IGLV2-23P01705 113 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 RPLP1P05386 114 aaKnown RBP15.05■□□□□ -0
SYNE4-202ENST00000340477 S100GP29377 79 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 NDPQ00604 133 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 FXYD3Q14802 87 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 DHRS11Q6UWP2 260 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 ZNF695Q8IW36 515 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 CMTM1Q8IZ96 169 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 TEX45Q8NA69 505 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 GRPEL2Q8TAA5 225 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 VSTM2AQ8TAG5 236 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 MOB3AQ96BX8 217 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 DIRAS2Q96HU8 199 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 AIFM2Q9BRQ8 373 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 MIXL1Q9H2W2 232 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 TPSG1Q9NRR2 321 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 FOXA2Q9Y261 457 aaPredicted RBP15.05■□□□□ -0
SYNE4-202ENST00000340477 CEPT1Q9Y6K0 416 aa15.05■□□□□ -0
SYNE4-202ENST00000340477 A0A1W2PN81 502 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 CTDSP2O14595 271 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 IFNA6P05013 189 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 CD33P20138 364 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 CHRNA7P36544 502 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 CRIP2P52943 208 aaPredicted RBP15.04■□□□□ -0
SYNE4-202ENST00000340477 RPL30P62888 115 aaKnown RBP15.04■□□□□ -0
SYNE4-202ENST00000340477 IL18Q14116 193 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 AADACL3Q5VUY0 350 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 PYHIN1Q6K0P9 492 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 UNQ5815/PRO19632Q6UWF5 114 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 RNF152Q8N8N0 203 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 MCFD2Q8NI22 146 aa15.04■□□□□ -0
SYNE4-202ENST00000340477 RSL24D1Q9UHA3 163 aaKnown RBP15.04■□□□□ -0
SYNE4-202ENST00000340477 HRASP01112 189 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 TBPP20226 339 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 PSMB8P28062 276 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 PPIFP30405 207 aaKnown RBP15.03■□□□□ -0
SYNE4-202ENST00000340477 EIF4EBP1Q13541 118 aaPredicted RBP15.03■□□□□ -0
SYNE4-202ENST00000340477 AKIRIN2Q53H80 203 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 RNASE10Q5GAN6 216 aaKnown RBP15.03■□□□□ -0
SYNE4-202ENST00000340477 LPCAT3Q6P1A2 487 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 ZNF818PQ6ZRF7 136 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms