RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 HES5Q5TA89 166 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 OR56B1Q8NGI3 324 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 PHB2Q99623 299 aa12.4□□□□□ -0.42
H3F3C-201ENST00000340398 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 CASQ2O14958 399 aaPredicted RBP12.39□□□□□ -0.43
H3F3C-201ENST00000340398 BRI3O95415 125 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 FCGR3AP08637 254 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 CALRP27797 417 aaKnown RBP12.39□□□□□ -0.43
H3F3C-201ENST00000340398 FABP5Q01469 135 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
H3F3C-201ENST00000340398 OR10J5Q8NHC4 309 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 FAM110AQ9BQ89 295 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 SCN3BQ9NY72 215 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 V9GY05 133 aa12.39□□□□□ -0.43
H3F3C-201ENST00000340398 A0A075B6Q4 140 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 J3QRK9 145 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 IFNA6P05013 189 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 GNB3P16520 340 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 SERPINB10P48595 397 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 TNXAQ16473 311 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 PRSS8Q16651 343 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 LCN12Q6JVE5 192 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 Q8N402 240 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 RAB3CQ96E17 227 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 SIGLEC8Q9NYZ4 499 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 RAB22AQ9UL26 194 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 RBM7Q9Y580 266 aaKnown RBP12.38□□□□□ -0.43
H3F3C-201ENST00000340398 HYDINQ4G0P3 5121 aa12.38□□□□□ -0.43
H3F3C-201ENST00000340398 LINC00473A8K010 186 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 BMPR1BO00238 502 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 ARL6IP5O75915 188 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 CRYZL1O95825 349 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 EDN2P20800 178 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
H3F3C-201ENST00000340398 RHOGP84095 191 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 TAGLNQ01995 201 aaKnown RBP12.37□□□□□ -0.43
H3F3C-201ENST00000340398 ZNF45Q02386 682 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
H3F3C-201ENST00000340398 TEX45Q8NA69 505 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 DDB2Q92466 427 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 SELENOKQ9Y6D0 94 aa12.37□□□□□ -0.43
H3F3C-201ENST00000340398 IGKV1D-8A0A087WSZ0 117 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 MPPED1O15442 326 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 OR2A4O95047 310 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 CD7P09564 240 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 MAP2K4P45985 399 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 OR10A3P58181 314 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 UBE2KP61086 200 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 MRPS15P82914 257 aaKnown RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 CBX3Q13185 183 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 CD300EQ496F6 205 aaPredicted RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 DEFB125Q8N687 156 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 SRSF12Q8WXF0 261 aaKnown RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 DUSP21Q9H596 190 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 ZNF430Q9H8G1 570 aaPredicted RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 ELF5Q9UKW6 265 aaPredicted RBP12.36□□□□□ -0.43
H3F3C-201ENST00000340398 CEPT1Q9Y6K0 416 aa12.36□□□□□ -0.43
H3F3C-201ENST00000340398 A0A0B4J203 849 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 RAB27BO00194 218 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 HLA-AP01891 365 aaKnown RBP12.35□□□□□ -0.43
H3F3C-201ENST00000340398 RRASP10301 218 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 CD81P60033 236 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 MLLT11Q13015 90 aaPredicted RBP12.35□□□□□ -0.43
H3F3C-201ENST00000340398 TRAM1Q15629 374 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 C10orf55Q5SWW7 151 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 OR10R2Q8NGX6 335 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 GINS4Q9BRT9 223 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 CCDC90BQ9GZT6 254 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 NKX1-2Q9UD57 310 aaPredicted RBP12.35□□□□□ -0.43
H3F3C-201ENST00000340398 TPRKBQ9Y3C4 175 aa12.35□□□□□ -0.43
H3F3C-201ENST00000340398 TRBV9A0A0B4J1U6 114 aa12.34□□□□□ -0.43
H3F3C-201ENST00000340398 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
H3F3C-201ENST00000340398 PPP5D1E7EU14 171 aa12.34□□□□□ -0.43
H3F3C-201ENST00000340398 MFNGO00587 321 aa12.34□□□□□ -0.43
H3F3C-201ENST00000340398 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
H3F3C-201ENST00000340398 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
H3F3C-201ENST00000340398 H1FOOQ8IZA3 346 aaPredicted RBP12.34□□□□□ -0.43
H3F3C-201ENST00000340398 MGLLQ99685 303 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms