RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OR4A8P0C604 315 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 AESQ08117 197 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 SLC25A40Q8TBP6 338 aa15.94■□□□□ 0.14
RTN4-201ENST00000317610 HSD17B10Q99714 261 aaKnown RBP15.94■□□□□ 0.14
RTN4-201ENST00000317610 PTPRBP23467 1997 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 CRYAAP02489 173 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 CD1BP29016 333 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 TRIP6Q15654 476 aaKnown RBP15.93■□□□□ 0.14
RTN4-201ENST00000317610 VASH2Q86V25 355 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 C11orf53Q8IXP5 236 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 OR5T1Q8NG75 326 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 PRR7Q8TB68 274 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 LURAP1Q96LR2 239 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 CHODLQ9H9P2 273 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 TRAPPC1Q9Y5R8 145 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 IGHV3-64DA0A0J9YX35 117 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 A0A0U1RQK1 487 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 ZNF320A2RRD8 509 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 NDUFB4O95168 129 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 SELEP16581 610 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 MEOX1P50221 254 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 PSG7Q13046 419 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 SPINK9Q5DT21 86 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 TMEM105Q8N8V8 129 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 TXNDC17Q9BRA2 123 aa15.93■□□□□ 0.14
RTN4-201ENST00000317610 MARCH11A6NNE9 402 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 C9orf172C9J069 976 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 MPDU1O75352 247 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 EGR1P18146 543 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 NUTF2P61970 127 aaKnown RBP15.92■□□□□ 0.14
RTN4-201ENST00000317610 USF2Q15853 346 aaPredicted RBP15.92■□□□□ 0.14
RTN4-201ENST00000317610 GCSAMLQ5JQS6 135 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 DCAF10Q5QP82 559 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 TGIF2LXQ8IUE1 241 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 NEU1Q99519 415 aa15.92■□□□□ 0.14
RTN4-201ENST00000317610 QTRT1Q9BXR0 403 aaKnown RBP15.92■□□□□ 0.14
RTN4-201ENST00000317610 TRAV38-1A0A0B4J264 116 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 WNT9BO14905 357 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 RBMXL2O75526 392 aaKnown RBP15.91■□□□□ 0.14
RTN4-201ENST00000317610 C1QTNF9P0C862 333 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 Q6ZR03 302 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 LINC00696Q6ZRV3 163 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 MRGPRDQ8TDS7 321 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 DERL1Q9BUN8 251 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 FKBP11Q9NYL4 201 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 ELOVL5Q9NYP7 299 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 FAM90A9PA6NNJ1 464 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 EREGO14944 169 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 SP1P08047 785 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 OPRK1P41145 380 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 UBE2G2P60604 165 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 CST9LP1Q5W188 147 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 UBALD2Q8IYN6 164 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 ZNF114Q8NC26 417 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 SFRP2Q96HF1 295 aa15.91■□□□□ 0.14
RTN4-201ENST00000317610 KLF13Q9Y2Y9 288 aaPredicted RBP15.91■□□□□ 0.14
RTN4-201ENST00000317610 OR9G9P0C7N8 305 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 SOX8P57073 446 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 C1orf194Q5T5A4 169 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 TEX38Q6PEX7 206 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 ACP7Q6ZNF0 438 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 MDS2Q8NDY4 140 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 WASF3Q9UPY6 502 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 KIR2DL5BA0A0G2JN68 375 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 KIR2DL5BA0A0G2JPC4 375 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 A0A1W2PPV4 95 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 RBFOX2O43251 390 aaKnown RBP eCLIP15.9■□□□□ 0.142e-9■■■■□ 21
RTN4-201ENST00000317610 GABRA2P47869 451 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 YPEL3P61236 119 aaPredicted RBP15.9■□□□□ 0.14
RTN4-201ENST00000317610 KIR2DL5AQ8N109 375 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 R3HDM4Q96D70 268 aa15.9■□□□□ 0.14
RTN4-201ENST00000317610 TMEM265A0A087WTH1 108 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 TNFSF15O95150 251 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 MPV17P39210 176 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 LINC00205P59089 165 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 ERVFC1-1P60608 527 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 ZNF826PQ6ZT77 177 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 AURKAIP1Q9NWT8 199 aaPredicted RBP15.89■□□□□ 0.13
RTN4-201ENST00000317610 TRBV20OR9-2A0A075B6H5 130 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 STAG3L2P0CL84 134 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 STAG3L3P0CL85 134 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 SSTR5P35346 364 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 EDDM3BP56851 147 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 TMPRSS3P57727 454 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 ZNF124Q15973 351 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 TMEM256Q8N2U0 113 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 OR13A1Q8NGR1 328 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 SGMS2Q8NHU3 365 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 FOXJ2Q9P0K8 574 aa15.89■□□□□ 0.13
RTN4-201ENST00000317610 FREM2Q5SZK8 3169 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 C21orf140B9A014 251 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 PRSS46E5RG02 174 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 KLRC4-KLRK1H3BQV0 150 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 TCAPO15273 167 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 GCH1P30793 250 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 UBE2NP61088 152 aaKnown RBP15.88■□□□□ 0.13
RTN4-201ENST00000317610 RPP30P78346 268 aaKnown RBP15.88■□□□□ 0.13
RTN4-201ENST00000317610 FOXF2Q12947 444 aa15.88■□□□□ 0.13
RTN4-201ENST00000317610 PDLIM3Q53GG5 364 aaPredicted RBP15.88■□□□□ 0.13
RTN4-201ENST00000317610 KLF14Q8TD94 323 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms