RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 C16orf95Q9H693 158 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 HRASLSQ9HDD0 168 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 MMP24Q9Y5R2 645 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 IL7P13232 177 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 RND3P61587 244 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 BAK1Q16611 211 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 KRTAP24-1Q3LI83 254 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 TMEM177Q53S58 311 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 GLDNQ6ZMI3 551 aaPredicted RBP14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 IDO2Q6ZQW0 420 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 Q8N2B8 174 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 OR2T6Q8NHC8 308 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 SDHCQ99643 169 aaPredicted RBP14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 RASL11BQ9BPW5 248 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 SLC25A21Q9BQT8 299 aaPredicted RBP14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 C19orf24Q9BVV8 132 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 BEX1Q9HBH7 125 aa14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 C14orf166Q9Y224 244 aaKnown RBP14.28□□□□□ -0.12
SSSCA1-201ENST00000309328 LINC00473A8K010 186 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 CREBL2O60519 120 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 NDUFA3O95167 84 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 CTSDP07339 412 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 RPS16P62249 146 aaKnown RBP14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 FAM71E2Q8N5Q1 922 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 C5orf56Q8N8D9 126 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 HARBI1Q96MB7 349 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 SLC2A9Q9NRM0 540 aa14.27□□□□□ -0.13
SSSCA1-201ENST00000309328 SHOXO15266 292 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 KCNAB3O43448 404 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 FCGR3BO75015 233 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 PGLYRP1O75594 196 aaPredicted RBP14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 CRYZL1O95825 349 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 HRASP01112 189 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 COMPP49747 757 aaPredicted RBP14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 FAAP20Q6NZ36 180 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 Q6ZSV7 163 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 VSTM2AQ8TAG5 236 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 PLSCR3Q9NRY6 295 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 COPZ2Q9P299 210 aa14.26□□□□□ -0.13
SSSCA1-201ENST00000309328 PIGBOS1A0A0B4J2F0 54 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 RRHO14718 337 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 TNFSF12O43508 249 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 RLN1P04808 185 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 F2RP25116 425 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 PIGPP57054 158 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 RPL30P62888 115 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 C5orf64Q2M2E5 130 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 Q8N9W7 124 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 OR13C8Q8NGS7 320 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 PLEKHA2Q9HB19 425 aa14.25□□□□□ -0.13
SSSCA1-201ENST00000309328 CLPSL1A2RUU4 121 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 HPRT1P00492 218 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 RPA2P15927 270 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 F2RL1P55085 397 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 TAS2R31P59538 309 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 SRSF2Q01130 221 aaKnown RBP14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 PLGLAQ15195 96 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 RBMS2Q15434 407 aaKnown RBP14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 PHLDA2Q53GA4 152 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 ARSJQ5FYB0 599 aaPredicted RBP14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 SPAG16Q8N0X2 631 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 OR51H1Q8NH63 302 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 MARCH1Q8TCQ1 289 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 COMMD9Q9P000 198 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 GPR132Q9UNW8 380 aa14.24□□□□□ -0.13
SSSCA1-201ENST00000309328 FBN1P35555 2871 aaKnown RBP14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 MPPED1O15442 326 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 AMY1AP04745 511 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 LINC00205P59089 165 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 UBE2KP61086 200 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 RELBQ01201 579 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 PSG5Q15238 335 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 LIN54Q6MZP7 749 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 TBC1D26Q86UD7 250 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 CADM3Q8N126 398 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 TEX45Q8NA69 505 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 ZNF702PQ9H963 129 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 ZNF580Q9UK33 172 aa14.23□□□□□ -0.13
SSSCA1-201ENST00000309328 H0Y980 276 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 PEX14O75381 377 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 UPK1BO75841 260 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 ATG12O94817 140 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 IGHG2P01859 326 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 FGF2P09038 288 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 NQO2P16083 231 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 VDAC2P45880 294 aaPredicted RBP14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 ERVK-16P61578 105 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 BLCAPP62952 87 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 FBLN7Q53RD9 439 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 FOXRED2Q8IWF2 684 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 LINC01006Q8NI28 216 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 GON7Q9BXV9 100 aa14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 METTL1Q9UBP6 276 aaKnown RBP14.22□□□□□ -0.13
SSSCA1-201ENST00000309328 SERPINE2P07093 398 aa14.21□□□□□ -0.13
SSSCA1-201ENST00000309328 POU2AF1Q16633 256 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms