RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ANOS1P23352 680 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ATP6V0CP27449 155 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 S100GP29377 79 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SRD5A2P31213 254 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NPBWR2P48146 333 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 RPS23P62266 143 aaKnown RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 VAMP2P63027 116 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 PNRC1Q12796 327 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TAF9Q16594 264 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 MPV17LQ2QL34 196 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 KRTAP24-1Q3LI83 254 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NMSQ5H8A3 153 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 PHYHD1Q5SRE7 291 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ABLIM2Q6H8Q1 611 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SPSB3Q6PJ21 355 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 H1FOOQ8IZA3 346 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SELENOHQ8IZQ5 122 aaKnown RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ZFP82Q8N141 532 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 CNEP1R1Q8N9A8 125 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF565Q8N9K5 539 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OR10AD1Q8NGE0 317 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OR5D18Q8NGL1 313 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OR5D13Q8NGL4 314 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OR2G3Q8NGZ4 309 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NANPQ8TBE9 248 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 FAM213BQ8TBF2 198 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NPRL2Q8WTW4 380 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TOMM40LQ969M1 308 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM45BQ96B21 275 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 MUCL1Q96DR8 90 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 FBXO17Q96EF6 278 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TVP23CQ96ET8 276 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF385AQ96PM9 386 aaKnown RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 P2RX4Q99571 388 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 HDHD3Q9BSH5 251 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-201ENST00000308987 C1QTNF5Q9BXJ0 243 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 SMIM3Q9BZL3 60 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 OPA3Q9H6K4 179 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NIT2Q9NQR4 276 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM38BQ9NVV0 291 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 TREM2Q9NZC2 230 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ZDHHC8Q9ULC8 765 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 ST3GAL6Q9Y274 331 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 MMP24Q9Y5R2 645 aa4.08□□□□□ -1.76
CKS1B-201ENST00000308987 NOTCH1P46531 2555 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 A0A0J9YW62 118 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 A0A1B0GU03 582 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 IGSF23A1L1A6 192 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SLC22A20A6NK97 555 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 A6NLC8 198 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF729A6NN14 1252 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF716A6NP11 495 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 LINC00587B1AMM8 73 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SEC14L6B5MCN3 397 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 NPIPB11E5RHQ5 1161 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 H0Y980 276 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 HSD17B6O14756 317 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 HS3ST1O14792 307 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 GEMIN2O14893 280 aaKnown RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 PROP1O75360 226 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 IGHV2-70P01814 119 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 IGHV4-39P01824 125 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 LCATP04180 440 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 AADACP22760 399 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 GNRHRP30968 328 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 PPP1CCP36873 323 aaKnown RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TAGLN2P37802 199 aaKnown RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 CD200P41217 278 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 HTR5AP47898 357 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 GLIPR1P48060 266 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 RND2P52198 227 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ATP5J2P56134 94 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TAS2R30P59541 319 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 FXYD4P59646 89 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 UBE2KP61086 200 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 POLR2GP62487 172 aaKnown RBP eCLIP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SERF2P84101 59 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF92Q03936 586 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 KIAA0141Q14154 515 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 CLEC12BQ2HXU8 276 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SNAI3Q3KNW1 292 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SP6Q3SY56 376 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 KRBOX4Q5JUW0 171 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 AKR1C8PQ5T2L2 129 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 RAET1LQ5VY80 246 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ADAM5Q6NVV9 412 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM182Q6ZP80 229 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-201ENST00000308987 AAED1Q7RTV5 226 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF429Q86V71 674 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF695Q8IW36 515 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 MKXQ8IYA7 352 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 CMTM1Q8IZ96 169 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 FAM24BQ8N5W8 94 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM252Q8N6L7 170 aa4.07□□□□□ -1.76
CKS1B-201ENST00000308987 SLC35G3Q8N808 338 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms