RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TMEM128Q5BJH2 165 aa21.73■■□□□ 1.07
HDAC3-201ENST00000305264 RBMS3Q6XE24 437 aaKnown RBP21.73■■□□□ 1.07
HDAC3-201ENST00000305264 EAF1Q96JC9 268 aaPredicted RBP21.73■■□□□ 1.07
HDAC3-201ENST00000305264 DUX5Q96PT3 197 aa21.73■■□□□ 1.07
HDAC3-201ENST00000305264 TCF19Q9Y242 345 aa21.73■■□□□ 1.07
HDAC3-201ENST00000305264 H0Y980 276 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 OR5AC1P0C628 307 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 FAM106CPP0CH98 169 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 VSIG10L2P0DP72 767 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 TAS2R31P59538 309 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 PPP1R1AQ13522 171 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 EBI3Q14213 229 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 TMEM219Q86XT9 240 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 THNSL2Q86YJ6 484 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 SGPP2Q8IWX5 399 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 PEX14O75381 377 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 MOSP00540 346 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 KIR2DS2P43631 304 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 DHODHQ02127 395 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 ZNF585BQ52M93 769 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 CCBE1Q6UXH8 406 aaPredicted RBP21.72■■□□□ 1.07
HDAC3-201ENST00000305264 OR4S2Q8NH73 311 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 ESM1Q9NQ30 184 aa21.72■■□□□ 1.07
HDAC3-201ENST00000305264 RRASP10301 218 aa21.71■■□□□ 1.07
HDAC3-201ENST00000305264 TMEM11P17152 192 aa21.71■■□□□ 1.07
HDAC3-201ENST00000305264 OR2T10Q8NGZ9 312 aa21.71■■□□□ 1.07
HDAC3-201ENST00000305264 VAMP1P23763 118 aa21.7■■□□□ 1.07
HDAC3-201ENST00000305264 Q8N6K4 173 aa21.7■■□□□ 1.07
HDAC3-201ENST00000305264 OR5R1Q8NH85 324 aa21.7■■□□□ 1.07
HDAC3-201ENST00000305264 FLYWCH2Q96CP2 140 aaKnown RBP21.7■■□□□ 1.07
HDAC3-201ENST00000305264 PRR13Q9NZ81 148 aa21.7■■□□□ 1.07
HDAC3-201ENST00000305264 DNAJC9-AS1A6NH13 148 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 RBFOX2O43251 390 aaKnown RBP eCLIP21.7■■□□□ 1.06
HDAC3-201ENST00000305264 OR4E1P0C645 316 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 CNTFRP26992 372 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 CBX3Q13185 183 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 SLC9A3R2Q15599 337 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 DHRS7BQ6IAN0 325 aaPredicted RBP21.7■■□□□ 1.06
HDAC3-201ENST00000305264 OR4C13Q8NGP0 309 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 ZNF418Q8TF45 676 aaPredicted RBP21.7■■□□□ 1.06
HDAC3-201ENST00000305264 GALNT14Q96FL9 552 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 MARVELD1Q9BSK0 173 aa21.7■■□□□ 1.06
HDAC3-201ENST00000305264 A6NDX4 124 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 BTBD17A6NE02 478 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 S1PR2O95136 353 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 MECP2P51608 486 aaKnown RBP21.69■■□□□ 1.06
HDAC3-201ENST00000305264 UBE2MP61081 183 aaKnown RBP21.69■■□□□ 1.06
HDAC3-201ENST00000305264 TMEM177Q53S58 311 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 TCTEX1D1Q8N7M0 179 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 HARBI1Q96MB7 349 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 VPREB3Q9UKI3 123 aa21.69■■□□□ 1.06
HDAC3-201ENST00000305264 C4orf46Q504U0 113 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 CD300LFQ8TDQ1 290 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 GLYATL2Q8WU03 294 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 TMEM222Q9H0R3 208 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 INMT-MINDY4F8WBC2 141 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 HLA-AP01891 365 aaKnown RBP21.68■■□□□ 1.06
HDAC3-201ENST00000305264 UCP1P25874 307 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 LPAR6P43657 344 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 RPS16P62249 146 aaKnown RBP21.68■■□□□ 1.06
HDAC3-201ENST00000305264 DHRS2Q13268 280 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 OXA1LQ15070 435 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 CHIAQ9BZP6 476 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 ALX4Q9H161 411 aaPredicted RBP21.68■■□□□ 1.06
HDAC3-201ENST00000305264 POMT1Q9Y6A1 747 aa21.68■■□□□ 1.06
HDAC3-201ENST00000305264 NF1P21359 2839 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 SRRM4A7MD48 611 aaKnown RBP21.67■■□□□ 1.06
HDAC3-201ENST00000305264 SHOXO15266 292 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 IFNA2P01563 188 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 F2RL1P55085 397 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 HILS1P60008 231 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 OR52B4Q8NGK2 314 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 FAM212BQ9NTI7 297 aaPredicted RBP21.67■■□□□ 1.06
HDAC3-201ENST00000305264 KCNIP3Q9Y2W7 256 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 CHST1O43916 411 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 SFT2D2O95562 160 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 IGKV1-39P01597 117 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 IGKV1D-39P04432 117 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 SERPINE2P07093 398 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 TMEM187Q14656 261 aa21.67■■□□□ 1.06
HDAC3-201ENST00000305264 OSR1Q8TAX0 266 aaPredicted RBP21.67■■□□□ 1.06
HDAC3-201ENST00000305264 C9orf170A2RU37 121 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 B3GALNT1O75752 331 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 HPRT1P00492 218 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 MMDQ15546 238 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 TRIM16LQ309B1 348 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 VKORC1L1Q8N0U8 176 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 TMEM86BQ8N661 226 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 LHFPL5Q8TAF8 219 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 CASTOR1Q8WTX7 329 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 SEC22CQ9BRL7 303 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 SLC25A33Q9BSK2 321 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 PLEKHA2Q9HB19 425 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 PITPNC1Q9UKF7 332 aa21.66■■□□□ 1.06
HDAC3-201ENST00000305264 IGLV2-23P01705 113 aa21.65■■□□□ 1.06
HDAC3-201ENST00000305264 LYG2Q86SG7 212 aa21.65■■□□□ 1.06
HDAC3-201ENST00000305264 RBM14Q96PK6 669 aaKnown RBP21.65■■□□□ 1.06
HDAC3-201ENST00000305264 PLSCR3Q9NRY6 295 aa21.65■■□□□ 1.06
HDAC3-201ENST00000305264 SETD2Q9BYW2 2564 aaPredicted RBP21.65■■□□□ 1.06
HDAC3-201ENST00000305264 OR2F2O95006 317 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms