RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PI3P19957 117 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 KIR2DS2P43631 304 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 SURF2Q15527 256 aaPredicted RBP19.51■□□□□ 0.71
HOXC9-201ENST00000303450 SLC2A9Q9NRM0 540 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 PLSCR3Q9NRY6 295 aa19.51■□□□□ 0.71
HOXC9-201ENST00000303450 NAP1L6A6NFF2 107 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 CRYZL1O95825 349 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 BLCAPP62952 87 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 RELBQ01201 579 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 C5orf56Q8N8D9 126 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 POC5Q8NA72 575 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 SCGB3A2Q96PL1 93 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 C7orf50Q9BRJ6 194 aaKnown RBP19.5■□□□□ 0.71
HOXC9-201ENST00000303450 RANBP3Q9H6Z4 567 aaPredicted RBP19.5■□□□□ 0.71
HOXC9-201ENST00000303450 KIAA1456Q9P272 454 aa19.5■□□□□ 0.71
HOXC9-201ENST00000303450 C14orf166Q9Y224 244 aaKnown RBP19.5■□□□□ 0.71
HOXC9-201ENST00000303450 SHOXO15266 292 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 NBR2O15453 112 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 HKR1P10072 659 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 CNTFRP26992 372 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 TMEM177Q53S58 311 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 C11orf88Q6PI97 169 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 Q6ZSV7 163 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 SPAG16Q8N0X2 631 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 OR4S2Q8NH73 311 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 HARBI1Q96MB7 349 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 TSNAXQ99598 290 aaKnown RBP19.49■□□□□ 0.71
HOXC9-201ENST00000303450 RASL11BQ9BPW5 248 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 C19orf24Q9BVV8 132 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 PRSS22Q9GZN4 317 aa19.49■□□□□ 0.71
HOXC9-201ENST00000303450 AMY1AP04745 511 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 CTSDP07339 412 aaPredicted RBP19.48■□□□□ 0.71
HOXC9-201ENST00000303450 RAG2P55895 527 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 PIGPP57054 158 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 TBC1D26Q86UD7 250 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 Q8N9W7 124 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 NPBQ8NG41 125 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 COPZ2Q9P299 210 aa19.48■□□□□ 0.71
HOXC9-201ENST00000303450 TSPAN9O75954 239 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 NDUFA7O95182 113 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 LGALS7P47929 136 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 RND3P61587 244 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 CCDC71LQ8N9Z2 235 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 OSR1Q8TAX0 266 aaPredicted RBP19.47■□□□□ 0.71
HOXC9-201ENST00000303450 LIN7CQ9NUP9 197 aaKnown RBP19.47■□□□□ 0.71
HOXC9-201ENST00000303450 GPR132Q9UNW8 380 aa19.47■□□□□ 0.71
HOXC9-201ENST00000303450 SH2D7A6NKC9 451 aaPredicted RBP19.46■□□□□ 0.71
HOXC9-201ENST00000303450 BRWD1-AS2P59051 145 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 C9orf152Q5JTZ5 239 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 FAM71E2Q8N5Q1 922 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 OR4F5Q8NH21 305 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 CD300LFQ8TDQ1 290 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 MPPED1O15442 326 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 RAMP3O60896 148 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 UPK1BO75841 260 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 NDUFA3O95167 84 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 F2RP25116 425 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 PLGLAQ15195 96 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 ARSJQ5FYB0 599 aaPredicted RBP19.46■□□□□ 0.71
HOXC9-201ENST00000303450 SLC25A21Q9BQT8 299 aaPredicted RBP19.46■□□□□ 0.71
HOXC9-201ENST00000303450 RTBDNQ9BSG5 229 aaPredicted RBP19.46■□□□□ 0.71
HOXC9-201ENST00000303450 C5orf66Q9H5L9 145 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 ZNF702PQ9H963 129 aa19.46■□□□□ 0.71
HOXC9-201ENST00000303450 FBN1P35555 2871 aaKnown RBP19.45■□□□□ 0.7
HOXC9-201ENST00000303450 RRHO14718 337 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 PLA2G10O15496 165 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 RBFOX2O43251 390 aaKnown RBP eCLIP19.45■□□□□ 0.7
HOXC9-201ENST00000303450 SPDEFO95238 335 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 CCR6P51684 374 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 PSG5Q15238 335 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 C5orf64Q2M2E5 130 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 TCTEX1D1Q8N7M0 179 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 OR2T6Q8NHC8 308 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 FBXL15Q9H469 300 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 VSIG4Q9Y279 399 aa19.45■□□□□ 0.7
HOXC9-201ENST00000303450 LYRM1O43325 122 aa19.44■□□□□ 0.7
HOXC9-201ENST00000303450 FOXL1Q12952 345 aa19.44■□□□□ 0.7
HOXC9-201ENST00000303450 RBMS2Q15434 407 aaKnown RBP19.44■□□□□ 0.7
HOXC9-201ENST00000303450 Q6ZS46 218 aa19.44■□□□□ 0.7
HOXC9-201ENST00000303450 C16orf95Q9H693 158 aa19.44■□□□□ 0.7
HOXC9-201ENST00000303450 METTL1Q9UBP6 276 aaKnown RBP19.44■□□□□ 0.7
HOXC9-201ENST00000303450 SRRM4A7MD48 611 aaKnown RBP19.43■□□□□ 0.7
HOXC9-201ENST00000303450 SLC25A17O43808 307 aa19.43■□□□□ 0.7
HOXC9-201ENST00000303450 HPRT1P00492 218 aa19.43■□□□□ 0.7
HOXC9-201ENST00000303450 IGLV2-23P01705 113 aa19.43■□□□□ 0.7
HOXC9-201ENST00000303450 BEX1Q9HBH7 125 aa19.43■□□□□ 0.7
HOXC9-201ENST00000303450 TMEM89A2RUT3 159 aa19.42■□□□□ 0.7
HOXC9-201ENST00000303450 VMA21Q3ZAQ7 101 aa19.42■□□□□ 0.7
HOXC9-201ENST00000303450 LIN54Q6MZP7 749 aa19.42■□□□□ 0.7
HOXC9-201ENST00000303450 Q8N2B8 174 aa19.42■□□□□ 0.7
HOXC9-201ENST00000303450 TEX13DA0A0J9YY54 714 aaPredicted RBP19.41■□□□□ 0.7
HOXC9-201ENST00000303450 HRASP01112 189 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 VSIG10L2P0DP72 767 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 LINC01006Q8NI28 216 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 TSC22D3Q99576 134 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 PLEKHA2Q9HB19 425 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 SIGLEC9Q9Y336 463 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 C3orf85A0A1B0GTC6 90 aa19.41■□□□□ 0.7
HOXC9-201ENST00000303450 MDKP21741 143 aaPredicted RBP19.41■□□□□ 0.7
HOXC9-201ENST00000303450 BTCP35070 178 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms