RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TGFAP01135 160 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 PRSS1P07477 247 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 RNF212Q495C1 297 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 TMEM116Q8NCL8 245 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 LSM10Q969L4 123 aaKnown RBP15.79■□□□□ 0.12
PCDH1-201ENST00000287008 LTBP1Q14766 1721 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 IGKV1D-43A0A0B4J1Z2 117 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 TEX50A0A1B0GTY4 177 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 FAM74A3Q4VXF1 159 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 TNFSF18Q9UNG2 199 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 RUNX1Q01196 453 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 CXorf66Q5JRM2 361 aaPredicted RBP15.79■□□□□ 0.12
PCDH1-201ENST00000287008 DDB2Q92466 427 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 ANAPC16Q96DE5 110 aa15.79■□□□□ 0.12
PCDH1-201ENST00000287008 C17orf100A8MU93 164 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 PHOX2AO14813 284 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 VSIG10L2P0DP72 767 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 P2RY4P51582 365 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF137PP52743 207 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 C1QTNF12Q5T7M4 302 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 GPR146Q96CH1 333 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 SSBP3Q9BWW4 388 aaPredicted RBP15.78■□□□□ 0.12
PCDH1-201ENST00000287008 TCF19Q9Y242 345 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 NPIPB11E5RHQ5 1161 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 MGPP08493 103 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 FXYD3Q14802 87 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 LRRC75AQ8NAA5 344 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 LURAP1Q96LR2 239 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 GPHA2Q96T91 129 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF253O75346 499 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 LCN2P80188 198 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 ACP7Q6ZNF0 438 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 MELTFP08582 738 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF345Q14585 488 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 PQLC2Q6ZP29 291 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 DEPPQ9NTK1 212 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 AUP1Q9Y679 476 aa15.78■□□□□ 0.12
PCDH1-201ENST00000287008 ARID2Q68CP9 1835 aa15.77■□□□□ 0.12
PCDH1-201ENST00000287008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 PLAUP00749 431 aa15.77■□□□□ 0.12
PCDH1-201ENST00000287008 ZNF837Q96EG3 531 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 DOCK7Q96N67 2140 aa15.77■□□□□ 0.12
PCDH1-201ENST00000287008 REPIN1Q9BWE0 567 aaKnown RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 MTCL1Q9Y4B5 1905 aaKnown RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 ZFHX2Q9C0A1 2572 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 CFDP00746 253 aaPredicted RBP15.77■□□□□ 0.12
PCDH1-201ENST00000287008 RBKSQ9H477 322 aa15.77■□□□□ 0.12
PCDH1-201ENST00000287008 KIF26BQ2KJY2 2108 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 ACACBO00763 2458 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 FAM201AQ5SY85 155 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 MRPL54Q6P161 138 aaKnown RBP15.77■□□□□ 0.11
PCDH1-201ENST00000287008 H1FOOQ8IZA3 346 aaPredicted RBP15.77■□□□□ 0.11
PCDH1-201ENST00000287008 FAM216BQ8N7L0 139 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 ZNF738Q8NE65 137 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 OR2D3Q8NGH3 330 aa15.77■□□□□ 0.11
PCDH1-201ENST00000287008 TUBGCP6Q96RT7 1819 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 PF4P02776 101 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 ATP5G2Q06055 141 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 ABLIM2Q6H8Q1 611 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 GBGT1Q8N5D6 347 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 OR52M1Q8NGK5 317 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 OR10C1Q96KK4 312 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 C1QTNF5Q9BXJ0 243 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 C7orf69Q9H7B7 122 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 TOMM20LQ6UXN7 152 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 DRAM1Q8N682 238 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 OR5AU1Q8NGC0 362 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 TUBD1Q9UJT1 453 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 TMEM218A2RU14 115 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 CRISP2P16562 243 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 HIST3H3Q16695 136 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 PRNTQ86SH4 94 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
PCDH1-201ENST00000287008 S1PR2O95136 353 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 RNFT1Q5M7Z0 435 aa15.76■□□□□ 0.11
PCDH1-201ENST00000287008 B4DEV8 164 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 FCGR2BP31994 310 aaPredicted RBP15.75■□□□□ 0.11
PCDH1-201ENST00000287008 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
PCDH1-201ENST00000287008 LGALSLQ3ZCW2 172 aaPredicted RBP15.75■□□□□ 0.11
PCDH1-201ENST00000287008 OR4B1Q8NGF8 309 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 RSG1Q9BU20 258 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 AWAT1Q58HT5 328 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 VAMP8Q9BV40 100 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 SCN5AQ14524 2016 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 CDKN1AP38936 164 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 TNFRSF9Q07011 255 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 C9orf62Q8N4C0 152 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 POC1AQ8NBT0 407 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 ZNF418Q8TF45 676 aaPredicted RBP15.75■□□□□ 0.11
PCDH1-201ENST00000287008 MED13LQ71F56 2210 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 IGLV3-32A0A0A0MS00 114 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 RHBDL1O75783 438 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 FOSL1P15407 271 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 RPL7P18124 248 aaKnown RBP15.75■□□□□ 0.11
PCDH1-201ENST00000287008 IL22RA2Q969J5 263 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 SLC25A33Q9BSK2 321 aa15.75■□□□□ 0.11
PCDH1-201ENST00000287008 TM4SF5O14894 197 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 DPPA3Q6W0C5 159 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 TMEM204Q9BSN7 226 aa15.74■□□□□ 0.11
PCDH1-201ENST00000287008 FAM74A7A6NL05 159 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms