RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HFEQ30201 348 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 HEPN1Q6WQI6 88 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 LYG1Q8N1E2 194 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 ZNF714Q96N38 554 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 STRAPQ9Y3F4 350 aaKnown RBP13.65□□□□□ -0.22
CCDC40-201ENST00000269318 NDUFA2O43678 99 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 C1QL1O75973 258 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 PPOXP50336 477 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
CCDC40-201ENST00000269318 DIDO1Q9BTC0 2240 aaKnown RBP13.65□□□□□ -0.22
CCDC40-201ENST00000269318 NBASA2RRP1 2371 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM218A2RU14 115 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 ZG16O60844 167 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 DAOP14920 347 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 THBS3P49746 956 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 ARHGDIBP52566 201 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 AKR1C1Q04828 323 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM182Q6ZP80 229 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF383Q8NA42 475 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 OR2G3Q8NGZ4 309 aa13.64□□□□□ -0.23
CCDC40-201ENST00000269318 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM8BA6NDV4 472 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 TRIM77I1YAP6 450 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 FSTL3O95633 263 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 CRYZL1O95825 349 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 NQO2P16083 231 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 COL8A2P25067 703 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 RUNX1Q01196 453 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 DTD1Q8TEA8 209 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 ZDHHC16Q969W1 377 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 ADTRPQ96IZ2 230 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 OR4C12Q96R67 309 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 QTRT1Q9BXR0 403 aaKnown RBP13.63□□□□□ -0.23
CCDC40-201ENST00000269318 HCFC1P51610 2035 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 MED19A0JLT2 244 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-201ENST00000269318 CAMLGP49069 296 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 HBG1P69891 147 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 HBG2P69892 147 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 H1FXQ92522 213 aaKnown RBP13.63□□□□□ -0.23
CCDC40-201ENST00000269318 NARS2Q96I59 477 aaKnown RBP13.63□□□□□ -0.23
CCDC40-201ENST00000269318 ZNRD1Q9P1U0 126 aa13.63□□□□□ -0.23
CCDC40-201ENST00000269318 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 UMAD1C9J7I0 102 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 LYNX1G3V0Z9 82 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 PPIHO43447 177 aaKnown RBP13.62□□□□□ -0.23
CCDC40-201ENST00000269318 LYNX1P0DP58 116 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 DLX6P56179 175 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 SSX9Q7RTT3 188 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 VKORC1L1Q8N0U8 176 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 PMS2P5A8MQ11 134 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
CCDC40-201ENST00000269318 IFNA5P01569 189 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 PRH1P02810 166 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 ADCYAP1P18509 176 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 OR2B8PP59922 312 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 ERVK-16P61578 105 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM155Q4W5P6 130 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 PDLIM3Q53GG5 364 aaPredicted RBP13.62□□□□□ -0.23
CCDC40-201ENST00000269318 CIB3Q96Q77 187 aaPredicted RBP13.62□□□□□ -0.23
CCDC40-201ENST00000269318 MS4A7Q9GZW8 240 aaPredicted RBP13.62□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM231Q9H6L2 316 aa13.62□□□□□ -0.23
CCDC40-201ENST00000269318 AGPAT2O15120 278 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 APOC3P02656 99 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 CD5P06127 495 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 CT45A6P0DMU7 189 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 CT45A5P0DMU8 189 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 CT45A7P0DMV0 189 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 RELBQ01201 579 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF833PQ6ZTB9 187 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 FAM96BQ9Y3D0 163 aa13.61□□□□□ -0.23
CCDC40-201ENST00000269318 TSPAN15O95858 294 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 IGHV2-70P01814 119 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 UQCRFS1P47985 274 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 C4orf17Q53FE4 359 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 SPINK9Q5DT21 86 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 C10orf91Q5T1B1 145 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 C11orf71Q6IPW1 123 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 OR52E5Q8NH55 327 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 ZNF596Q8TC21 504 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 PARD6GQ9BYG4 376 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-201ENST00000269318 UQCC1Q9NVA1 299 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 YLPM1P49750 1951 aaKnown RBP13.6□□□□□ -0.23
CCDC40-201ENST00000269318 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 SNCAP37840 140 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 SLC38A11Q08AI6 406 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 LRRC75BQ2VPJ9 315 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 COMMD1Q8N668 190 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 OR4A16Q8NH70 328 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
CCDC40-201ENST00000269318 CEBPZOSA8MTT3 80 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms