RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CD33P20138 364 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 MPV17P39210 176 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 Q8IYB0 196 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 OR4P4Q8NGL7 312 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 HSD17B10Q99714 261 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 TMEM131Q92545 1883 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 MT-CO2P00403 227 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 CLDN18P56856 261 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 P2RY6Q15077 328 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNRF1Q8ND25 227 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 KLF14Q8TD94 323 aaPredicted RBP13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 FOXI3A8MTJ6 420 aaPredicted RBP13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 RPL19P84098 196 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 WDYHV1Q96HA8 205 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 TAAR6Q96RI8 345 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 NAPSAO96009 420 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 ATP5G3P48201 142 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 REG1BP48304 166 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 PITPNC1Q9UKF7 332 aa13.66□□□□□ -0.22
PDZRN3-201ENST00000263666 CREBBPQ92793 2442 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 PSG7Q13046 419 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 RPL39P5Q59GN2 51 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 PRR31Q5SQ13 230 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 TMEM42Q69YG0 159 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 CRIP3Q6Q6R5 217 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 IL36GQ9NZH8 169 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 ETV2O00321 342 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 SERF2P84101 59 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 ZNF324BQ6AW86 544 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 PSPNO60542 156 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 OR10J4P0C629 311 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 RPL30P62888 115 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 IMMP2LQ96T52 175 aa13.65□□□□□ -0.22
PDZRN3-201ENST00000263666 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 OR5G3P0C626 314 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 DDTP30046 118 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 OR4X1Q8NH49 305 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 SSC4DQ8WTU2 575 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 QTRT1Q9BXR0 403 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 PAM16Q9Y3D7 125 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 CHD3Q12873 2000 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 CDX4O14627 284 aaPredicted RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 TCF23Q7RTU1 214 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 CISD2Q8N5K1 135 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 EDARADDQ8WWZ3 215 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 OOEPA6NGQ2 149 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 FCN1O00602 326 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 CD1BP29016 333 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 OR13A1Q8NGR1 328 aa13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 OPN3Q9H1Y3 402 aaPredicted RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 CISD1Q9NZ45 108 aaKnown RBP13.64□□□□□ -0.23
PDZRN3-201ENST00000263666 B4DEV8 164 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 IER3P46695 156 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 FGF23Q9GZV9 251 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 SMDT1Q9H4I9 107 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 ZGRF1Q86YA3 2104 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 CEACAM1P13688 526 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 NHLRC2Q8NBF2 726 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 FDCSPQ8NFU4 85 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 OR1P1Q8NH06 330 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 SGK494Q96LW2 274 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 CLDN14O95500 239 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 PAX9P55771 341 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 VWA1Q6PCB0 445 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 Q6ZPA2 131 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 WFDC8Q8IUA0 241 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 CBLN4Q9NTU7 201 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 NAT8BQ9UHF3 227 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 METRNQ9UJH8 293 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 ELOA3CA0A087WX78 387 aaPredicted RBP13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 LRRC75BQ2VPJ9 315 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 LINC00469Q8N7U9 141 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
PDZRN3-201ENST00000263666 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 NUP210LQ5VU65 1888 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 IGHV3-21A0A0B4J1V1 117 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 A0A1B0GUS0 222 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A10PA6NDY2 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A18PA6NE21 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A16PA6NEW6 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A20PA6NIJ5 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A8PA6NJQ4 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A7PA6NKC0 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A22PA8MWA6 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A12PA8MX19 464 aa13.62□□□□□ -0.23
PDZRN3-201ENST00000263666 FAM90A5PA8MXJ8 464 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms