RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 NUP214P35658 2090 aaPredicted RBP10.72□□□□□ -0.69
ARFGEF1-201ENST00000262215 LINC00587B1AMM8 73 aa10.72□□□□□ -0.69
ARFGEF1-201ENST00000262215 DUX3Q96PT4 197 aa10.72□□□□□ -0.69
ARFGEF1-201ENST00000262215 OR11H4Q8NGC9 324 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 NPPCP23582 126 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 WFDC12Q8WWY7 111 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 PMCHL2Q9BQD1 86 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 KCNE5Q9UJ90 142 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 S1PR2O95136 353 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 BGLAPP02818 100 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 IRF3Q14653 427 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 DCAF10Q5QP82 559 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 TMEM91Q6ZNR0 172 aa10.71□□□□□ -0.69
ARFGEF1-201ENST00000262215 ICAM4Q14773 271 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 PPIAL4CA0A0B4J2A2 164 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 PPIAL4GP0DN37 164 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 DRD3P35462 400 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 ATP5J2P56134 94 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 SNRPD3P62318 126 aaKnown RBP10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 PSG9Q00887 426 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 DERL1Q9BUN8 251 aa10.71□□□□□ -0.7
ARFGEF1-201ENST00000262215 PTP4A3O75365 173 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 MALP21145 153 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 ZNF660Q6AZW8 331 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 SPSB4Q96A44 273 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 SIRT4Q9Y6E7 314 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 LOC390937A0A1W2PQ73 354 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 SLC17A3O00476 420 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 MT-ND6P03923 174 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 SERF2P84101 59 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 WDR82Q6UXN9 313 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 LINC01465Q8N7H1 131 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 ALKBH7Q9BT30 221 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 PGLYRP1O75594 196 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 PEX11BO96011 259 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 RPS11P62280 158 aaKnown RBP eCLIP10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 CD300LDQ6UXZ3 194 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 NUP188Q5SRE5 1749 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 C4AP0C0L4 1744 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 IGHV3-64A0A075B6Q5 118 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 NPC2P61916 151 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 PNKDQ8N490 385 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 DSPPQ9NZW4 1301 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 C1QCP02747 245 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 CNTFRP26992 372 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 HMGA2P52926 109 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 RIPPLY3P57055 190 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 Q5BKY6 102 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
ARFGEF1-201ENST00000262215 NKX2-8O15522 239 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 RND3P61587 244 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 CFAP161Q6P656 301 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 MMD2Q8IY49 270 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 TMEM52Q8NDY8 209 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 A0A0J9YW62 118 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 MGST3O14880 152 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 APOHP02749 345 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 HOXD4P09016 255 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 CD69Q07108 199 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 OR51G1Q8NGK1 321 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 C17orf51A8MQB3 221 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 CISD3P0C7P0 127 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 STARD6P59095 220 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 CEACAM21Q3KPI0 293 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 C10orf35Q96D05 121 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 ST6GALNAC2Q9UJ37 374 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 TRGV2A0A075B6R0 118 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 C7orf66A4D0T2 115 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 ACSF3Q4G176 576 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 SNAI3Q3KNW1 292 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 FAM71F2Q6NXP2 309 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 LINC01587Q99440 93 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 PIMREGQ9BSJ6 248 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 GSN-AS1Q9NRJ2 163 aa10.69□□□□□ -0.7
ARFGEF1-201ENST00000262215 DPRXA6NFQ7 191 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 MC5RP33032 325 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 CENPWQ5EE01 88 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 LIMS2Q7Z4I7 341 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 GGACTQ9BVM4 153 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 TRGV3P03979 118 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 IDI2-AS1Q9NZ38 188 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 DMRT1Q9Y5R6 373 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 NPIPB4C9JG80 1138 aa10.68□□□□□ -0.7
ARFGEF1-201ENST00000262215 TSPOP30536 169 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms