RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TRGV10A0A0A0MS01 117 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 OR5B21A6NL26 309 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 SERPINE3A8MV23 424 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 CCL21O00585 134 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 MPIG6BO95866 241 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 CT45A10P0DMU9 189 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 MTCP1P56278 107 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ATP6V1FQ16864 119 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 Q6ZRG5 221 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ZDHHC23Q8IYP9 409 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC38A6Q8IZM9 456 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GINS3Q9BRX5 216 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 MPC1Q9Y5U8 109 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ODF3BA8MYP8 253 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 M0QYG6 137 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 EEF1E1O43324 174 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 LYRM1O43325 122 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 NDUFA2O43678 99 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ADAP1O75689 374 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 BLVRBP30043 206 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GPM6AP51674 278 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 OR10J5Q8NHC4 309 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 EMG1Q92979 244 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GAL3ST1Q99999 423 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 CACNG6Q9BXT2 260 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM234AQ9H0X4 552 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 OR51B6Q9H340 312 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM30CPA0ZSE6 113 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 DYRK1AQ13627 763 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 SSX2Q16385 188 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 MLANAQ16655 118 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF787Q6DD87 383 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 GPHB5Q86YW7 130 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 COPS9Q8WXC6 57 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 JMJD8Q96S16 334 aa4.51□□□□□ -1.69
TOPBP1-201ENST00000260810 HRASP01112 189 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 NPPCP23582 126 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 GABRA2P47869 451 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ATP5IP56385 69 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 IL24Q13007 206 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 TIMM23BQ5SRD1 257 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 LYRM7Q5U5X0 104 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SPICQ8N5J4 248 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 NUP37Q8NFH4 326 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR52M1Q8NGK5 317 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR1L1Q8NH94 360 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 RPUSD4Q96CM3 377 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 C18orf12Q96KH6 178 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SLC35D1Q9NTN3 355 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 TRAV18A0A075B6X5 111 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 A0A1W2PPI3 338 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 HMX3A6NHT5 357 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 F5H5K5 113 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PRKACAP17612 351 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF137PP52743 207 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ACP7Q6ZNF0 438 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 KCNRGQ8N5I3 272 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ARPC5LQ9BPX5 153 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF436Q9C0F3 470 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 EIF5A2Q9GZV4 153 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 A0A1W2PN81 502 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 C12orf77C9JDV5 145 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 FGF2P09038 288 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CHRNA7P36544 502 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PSMB3P49720 205 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 TMEM267Q0VDI3 215 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 FAM58AQ8N1B3 248 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 C1orf162Q8NEQ5 155 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PIGCQ92535 297 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CXXC4Q9H2H0 198 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 Q9N2K0 584 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 TAS2R3Q9NYW6 316 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR5AC2Q9NZP5 309 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 IGHV3OR15-7A0A075B7D8 119 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SDCBPO00560 298 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR2H2O95918 312 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 BMP5P22003 454 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 HTR2BP41595 481 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 PJVKQ0ZLH3 352 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 TAF9Q16594 264 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 ZNF626Q68DY1 528 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 BOLLQ8N9W6 283 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SUMF2Q8NBJ7 301 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CASTOR1Q8WTX7 329 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SUCNR1Q9BXA5 334 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 KCNJ16Q9NPI9 418 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 UFSP2Q9NUQ7 469 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 OR6C3Q9NZP0 311 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 DUXBA0A1W2PPF3 345 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 hADV38S2A0JD32 116 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 EEF1E1-BLOC1S5C9J1V9 151 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CYB5R3P00387 301 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 CD3EP07766 207 aa4.5□□□□□ -1.69
TOPBP1-201ENST00000260810 SRSF2Q01130 221 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms