RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
VPS25-201ENST00000253794 TCTEX1D2Q8WW35 142 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
VPS25-201ENST00000253794 C14orf166Q9Y224 244 aaKnown RBP11.26□□□□□ -0.61
VPS25-201ENST00000253794 VSIG4Q9Y279 399 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 ATRQ13535 2644 aa11.26□□□□□ -0.61
VPS25-201ENST00000253794 MPPED1O15442 326 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 RLN1P04808 185 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 LGALS7P47929 136 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 CCR6P51684 374 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 PIGPP57054 158 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 CBX3Q13185 183 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 HES1Q14469 280 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 ABCA11PQ4W5N1 156 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 PHLDA2Q53GA4 152 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 CADM3Q8N126 398 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
VPS25-201ENST00000253794 RITA1Q96K30 269 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 GPHA2Q96T91 129 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 RANBP3Q9H6Z4 567 aaPredicted RBP11.25□□□□□ -0.61
VPS25-201ENST00000253794 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
VPS25-201ENST00000253794 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 CRYM-AS1A6NIL9 109 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 H7C2Y5 167 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 FCGR3BO75015 233 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 IGLV2-23P01705 113 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 AMY1AP04745 511 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 PI3P19957 117 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 DHODHQ02127 395 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 MZT2BQ6NZ67 158 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 C11orf88Q6PI97 169 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 SPAG16Q8N0X2 631 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 DUX5Q96PT3 197 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 TSNAXQ99598 290 aaKnown RBP11.24□□□□□ -0.61
VPS25-201ENST00000253794 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 COPZ2Q9P299 210 aa11.24□□□□□ -0.61
VPS25-201ENST00000253794 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 H0Y980 276 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 NBR2O15453 112 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 RAMP3O60896 148 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 CRYZL1O95825 349 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 HPRT1P00492 218 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 VSIG10L2P0DP72 767 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 RIPPLY3P57055 190 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 DEFA1P59665 94 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 DEFA3P59666 94 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 UBE2MP61081 183 aaKnown RBP11.23□□□□□ -0.61
VPS25-201ENST00000253794 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 Q8N2B8 174 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 C5orf56Q8N8D9 126 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 Q8N9W7 124 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 POC5Q8NA72 575 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 OR51H1Q8NH63 302 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 GALNT14Q96FL9 552 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 NAA60Q9H7X0 242 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 COMMD9Q9P000 198 aa11.23□□□□□ -0.61
VPS25-201ENST00000253794 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
VPS25-201ENST00000253794 RRHO14718 337 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 TSPAN9O75954 239 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 NDUFA7O95182 113 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 CRYGBP07316 175 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 RPA2P15927 270 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 UCP1P25874 307 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 MECP2P51608 486 aaKnown RBP11.22□□□□□ -0.61
VPS25-201ENST00000253794 F2RL1P55085 397 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 TAS2R31P59538 309 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 UBE2KP61086 200 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 RPS16P62249 146 aaKnown RBP11.22□□□□□ -0.61
VPS25-201ENST00000253794 HNF4GQ14541 408 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 PSG5Q15238 335 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 MMDQ15546 238 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 TMEM128Q5BJH2 165 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 SLC25A42Q86VD7 318 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
VPS25-201ENST00000253794 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
VPS25-201ENST00000253794 TNFRSF19Q9NS68 423 aa11.22□□□□□ -0.61
VPS25-201ENST00000253794 SHOXO15266 292 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 HRASP01112 189 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 HLA-DRB1P01911 266 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 TCRBP04435 133 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 IL6RP08887 468 aaPredicted RBP11.21□□□□□ -0.61
VPS25-201ENST00000253794 FGF2P09038 288 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 CNTFRP26992 372 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 SUPT4H1P63272 117 aaKnown RBP11.21□□□□□ -0.61
VPS25-201ENST00000253794 C5orf64Q2M2E5 130 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 OR2B11Q5JQS5 317 aa11.21□□□□□ -0.61
VPS25-201ENST00000253794 PUSL1Q8N0Z8 303 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms