RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 PGLYRP4Q96LB8 373 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 A0A087WV48 116 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 A6NJY4 79 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 SLC17A3O00476 420 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TFPI2P48307 235 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 OR1L1Q8NH94 360 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 GCHFRP30047 84 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TIMD4Q96H15 378 aa11.84□□□□□ -0.51
HCFC2-201ENST00000229330 TMSB15BA0A087X1C1 80 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 TMEM210A6NLX4 147 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 CRYABP02511 175 aaKnown RBP11.83□□□□□ -0.51
HCFC2-201ENST00000229330 OR10AG1Q8NH19 301 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 PRDM13Q9H4Q3 707 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 NRN1Q9NPD7 142 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 PLA2G3Q9NZ20 509 aa11.83□□□□□ -0.51
HCFC2-201ENST00000229330 LIFP15018 202 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 SNRNP40Q96DI7 357 aaKnown RBP11.83□□□□□ -0.52
HCFC2-201ENST00000229330 RGPD3A6NKT7 1758 aaPredicted RBP11.83□□□□□ -0.52
HCFC2-201ENST00000229330 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 PRRG2O14669 202 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 LYZL6O75951 148 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 GAB4Q2WGN9 574 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 WFDC1Q9HC57 220 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 PIKFYVEQ9Y2I7 2098 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 CCL3P10147 92 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 A1L4Q6 167 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 LIPFP07098 398 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 UCP1P25874 307 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
HCFC2-201ENST00000229330 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 ST6GALNAC6Q969X2 333 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
HCFC2-201ENST00000229330 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 GDF9O60383 454 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 SMIM13P0DJ93 91 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 ADMP35318 185 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 C18orf12Q96KH6 178 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
HCFC2-201ENST00000229330 TNFSF13O75888 250 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 A0A1B0GW64 132 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 OR2H2O95918 312 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 OTOFQ9HC10 1997 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 NPIPB13A6NJU9 1138 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 NPIPB4C9JG80 1138 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 F5H697 171 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 CABIN1Q9Y6J0 2220 aa11.82□□□□□ -0.52
HCFC2-201ENST00000229330 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 SAXO1Q8IYX7 474 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 RPEQ96AT9 228 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 RASL11BQ9BPW5 248 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 NPBWR2P48146 333 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 RPL30P62888 115 aaKnown RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 Q5PR19 223 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 ZNF324BQ6AW86 544 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 DUSP15Q9H1R2 295 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 CD40P25942 277 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 ERASQ7Z444 233 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 FBLN5Q9UBX5 448 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 HYPMO75409 117 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 OR4A8P0C604 315 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 SSPNQ14714 243 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 KCNMB1Q16558 191 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 LDLRAD2Q5SZI1 272 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 TCF23Q7RTU1 214 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 AMMECR1Q9Y4X0 333 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 A0A0J9YW62 118 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 PGPA6NDG6 321 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 SFTPCP11686 197 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-201ENST00000229330 ZNF83P51522 516 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 DEFB124Q8NES8 71 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
HCFC2-201ENST00000229330 MKRN2OSH3BPM6 223 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 SEC16AO15027 2179 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 ATP5G3P48201 142 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 MEOX1P50221 254 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
HCFC2-201ENST00000229330 MMDQ15546 238 aa11.8□□□□□ -0.52
HCFC2-201ENST00000229330 RIPPLY2Q5TAB7 128 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms