RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TRAV41A0A0B4J266 112 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 H3BMQ9 156 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 KIR2DS2P43631 304 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 UBE2KP61086 200 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 NDPQ00604 133 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 TEX45Q8NA69 505 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 BVESQ8NE79 360 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 OR5H2Q8NGV7 314 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 FAM110DQ8TAY7 271 aaPredicted RBP13.65□□□□□ -0.22
MRPL28-201ENST00000199706 ISOC1Q96CN7 298 aa13.65□□□□□ -0.22
MRPL28-201ENST00000199706 FAM25AB3EWG3 89 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 FAM25CB3EWG5 89 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 FAM25GB3EWG6 89 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 SHOXO15266 292 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
MRPL28-201ENST00000199706 SLC25A17O43808 307 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 CREBL2O60519 120 aaPredicted RBP13.64□□□□□ -0.23
MRPL28-201ENST00000199706 PF4V1P10720 104 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 TBPP20226 339 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
MRPL28-201ENST00000199706 MRPS10P82664 201 aaKnown RBP13.64□□□□□ -0.23
MRPL28-201ENST00000199706 TMEM267Q0VDI3 215 aaPredicted RBP13.64□□□□□ -0.23
MRPL28-201ENST00000199706 AKIRIN2Q53H80 203 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 ACTBL2Q562R1 376 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 PYHIN1Q6K0P9 492 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 WFDC9Q8NEX5 89 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 PARP11Q9NR21 331 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 EHFQ9NZC4 300 aa13.64□□□□□ -0.23
MRPL28-201ENST00000199706 MEIS3P1A6NDR6 274 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
MRPL28-201ENST00000199706 FCN1O00602 326 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 CRYZL1O95825 349 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 HERV-K104P61576 105 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
MRPL28-201ENST00000199706 VMA21Q3ZAQ7 101 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 KHDC1LQ5JSQ8 128 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 HIST2H2BDQ6DRA6 164 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 SNX29P2Q8IUI4 249 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 LYSMD2Q8IV50 215 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 EXTL2Q9UBQ6 330 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 NUBP2Q9Y5Y2 271 aa13.63□□□□□ -0.23
MRPL28-201ENST00000199706 CA2P00918 260 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 HRH1P35367 487 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 RPL30P62888 115 aaKnown RBP13.62□□□□□ -0.23
MRPL28-201ENST00000199706 CATR1Q13166 79 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 VAX1Q5SQQ9 334 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 ZNF695Q8IW36 515 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 MFSD4AQ8N468 514 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 OR5M8Q8NGP6 311 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 ARPC1AQ92747 370 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 SLIRPQ9GZT3 109 aaKnown RBP13.62□□□□□ -0.23
MRPL28-201ENST00000199706 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 MIXL1Q9H2W2 232 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 FOXA2Q9Y261 457 aaPredicted RBP13.62□□□□□ -0.23
MRPL28-201ENST00000199706 FBXO7Q9Y3I1 522 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 CEPT1Q9Y6K0 416 aa13.62□□□□□ -0.23
MRPL28-201ENST00000199706 A0A1W2PRX2 142 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 SRRM4A7MD48 611 aaKnown RBP13.61□□□□□ -0.23
MRPL28-201ENST00000199706 G3V318 75 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 FCGR3BO75015 233 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 BRI3O95415 125 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 EGR2P11161 476 aaPredicted RBP13.61□□□□□ -0.23
MRPL28-201ENST00000199706 RFX2P48378 723 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 SSBP2P81877 361 aaPredicted RBP13.61□□□□□ -0.23
MRPL28-201ENST00000199706 LAX1Q8IWV1 398 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 OR6F1Q8NGZ6 308 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 VSTM2AQ8TAG5 236 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 CD300LFQ8TDQ1 290 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 TCTEX1D2Q8WW35 142 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 UBE2E2Q96LR5 201 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 NXF2Q9GZY0 626 aaKnown RBP13.61□□□□□ -0.23
MRPL28-201ENST00000199706 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 TPSG1Q9NRR2 321 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 TAS2R8Q9NYW2 309 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 MTFP1Q9UDX5 166 aa13.61□□□□□ -0.23
MRPL28-201ENST00000199706 H3BUA1 57 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 RGS5O15539 181 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 PF4P02776 101 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 RPLP1P05386 114 aaKnown RBP13.6□□□□□ -0.23
MRPL28-201ENST00000199706 FGF2P09038 288 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 RUNX1Q01196 453 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 FXYD3Q14802 87 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 PRSS8Q16651 343 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 KPRPQ5T749 579 aaPredicted RBP13.6□□□□□ -0.23
MRPL28-201ENST00000199706 ETV3LQ6ZN32 361 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 KLHL30-AS1Q8NEE0 82 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 C4orf3Q8WVX3 66 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 ABHD1Q96SE0 405 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 ZNF2Q9BSG1 426 aaPredicted RBP13.6□□□□□ -0.23
MRPL28-201ENST00000199706 RBM38Q9H0Z9 239 aaKnown RBP13.6□□□□□ -0.23
MRPL28-201ENST00000199706 WSB1Q9Y6I7 421 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 A3GALT2U3KPV4 340 aa13.6□□□□□ -0.23
MRPL28-201ENST00000199706 GABARAPH6UMI1 98 aa13.59□□□□□ -0.23
MRPL28-201ENST00000199706 J3QRK9 145 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms