RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 MrnipQ9D1F5 335 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 AplfQ9D842 499 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rhox4bQ9JI43 205 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 NacaP70670 2187 aaKnown RBP12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gm16519F8VQK7 162 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 H2-M10.1O19443 331 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vgll4Q80V24 287 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Neil3Q8K203 606 aaKnown RBP12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vrk3Q8K3G5 453 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tmem33Q9CR67 247 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ramp3Q9WUP1 147 aa12.18□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 RnlsA7RDN6 342 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vmn1r5B2RQT2 315 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 P01661 131 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 P01662 111 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 P01663 111 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Hist1h1dP43277 221 aaKnown RBP12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Timm8bP62077 83 aaKnown RBP12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr43Q7TRX1 313 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr403Q7TRX2 313 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 H2-M10.6Q85ZW5 330 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tox4Q8BU11 619 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 TprkbQ8QZZ7 175 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr980Q8VH08 310 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tspan32Q9JHH2 256 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rsg1A2A825 258 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 P01798 113 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Igsf21Q7TNR6 468 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Stfa1P35175 97 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ca10P61215 328 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Bud31Q6PGH1 103 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vmn1r178Q8R2B6 304 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gjc3Q921C1 269 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Malsu1Q9CWV0 228 aa12.17□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Dnase1P49183 284 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Trav6-2Q5R1I4 113 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tssk5Q8C1R0 372 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 FkrpQ8CG64 494 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr638Q8VH20 321 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 UmodQ91X17 642 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Shisa5Q9D7I0 235 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Myo16Q5DU14 1919 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Prrt2E9PUL5 346 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Zfp58P16372 489 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 St3gal2Q11204 350 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mcrip1Q3UGS4 97 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ewsr1Q61545 655 aaKnown RBP12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr1371Q7TQT7 311 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 F12Q80YC5 597 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vps25Q9CQ80 176 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Prob1A0A087WR45 1010 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Prss47A0A0N4SVQ0 395 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr62L7MU75 315 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Il4P07750 140 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mpc1P63030 109 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 SspnQ62147 216 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rbm38Q62176 237 aaKnown RBP12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 RflnaQ7TS73 204 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mob3cQ8BJG4 216 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr1038Q8VGS1 319 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ccdc198Q9CPZ1 294 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Dram2Q9CR48 267 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mllt1Q9ERL0 547 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Nup210lQ9D2F7 1881 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gm14409A2ARR8 349 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Obp2bA2BHR0 176 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 LipiF6YQT7 476 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mtnd6P03925 172 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 C5ar1P30993 351 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 PjvkQ0ZLH2 352 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Cfhr1Q61406 343 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tmem128Q9CZB9 163 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tex37Q9DAG4 180 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 NpffQ9WVA8 114 aa12.16□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ogg1O08760 345 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 PtgfrP43117 366 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr90Q0VEL5 310 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Slc25a31Q3V132 320 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Pitpnc1Q8K4R4 332 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Vmn1r193Q8R258 319 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mfsd4b1Q8VCV9 425 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr1324Q8VEU7 332 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tctex1d2Q9CQ66 144 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Q9CQ90 155 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gm14288E9Q9W0 88 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gm20939L7N243 523 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ifna6P07350 189 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Sox7P40646 380 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rnd1Q8BLR7 232 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Lrp11Q8CB67 483 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Obsl1D3YYU8 1804 aaKnown RBP12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Plxna3P70208 1872 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ighv1-54A0A075B5W5 117 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr548-ps1A0A1B0GSG0 314 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Gm6576F6YTZ4 274 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rpl29P47915 160 aaKnown RBP12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Slc25a4P48962 298 aaKnown RBP12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mob1bQ8BPB0 216 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Uqcc1Q9CWU6 295 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 HikeshiQ9DD02 197 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms