RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 RND3P61587 244 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
PHGDH-220ENST00000641570 DHRS7BQ6IAN0 325 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-220ENST00000641570 C1orf229Q6ZS94 237 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-220ENST00000641570 NRARPQ7Z6K4 114 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 PDPNQ86YL7 162 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 SPAG16Q8N0X2 631 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 SSMEM1Q8WWF3 244 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 FLYWCH2Q96CP2 140 aaKnown RBP10.48□□□□□ -0.73
PHGDH-220ENST00000641570 SSX3Q99909 188 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 RAB18Q9NP72 206 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 C1RLQ9NZP8 487 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 GPR132Q9UNW8 380 aa10.48□□□□□ -0.73
PHGDH-220ENST00000641570 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 C3orf85A0A1B0GTC6 90 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 SHOXO15266 292 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 MPPED1O15442 326 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 PGLYRP1O75594 196 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 FSHBP01225 129 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 IFNA2P01563 188 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 IGKV1D-33P01593 117 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 IGKV1-33P01594 117 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 HLA-AP01891 365 aaKnown RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 CD1BP29016 333 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 DUTP33316 252 aaKnown RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 DHODHQ02127 395 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 AANATQ16613 207 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 TMEM128Q5BJH2 165 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 UTF1Q5T230 341 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 GLDNQ6ZMI3 551 aaPredicted RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 NABP2Q9BQ15 211 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 FLNAP21333 2647 aaKnown RBP10.47□□□□□ -0.73
PHGDH-220ENST00000641570 TEX15Q9BXT5 2789 aa10.47□□□□□ -0.73
PHGDH-220ENST00000641570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.738e-8■■□□□ 12.2
PHGDH-220ENST00000641570 NCBP2LA6PVI3 153 aaKnown RBP10.46□□□□□ -0.73
PHGDH-220ENST00000641570 INMT-MINDY4F8WBC2 141 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 H0Y980 276 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 LY6LH3BQJ8 138 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 H3BUX3 64 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CREBL2O60519 120 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-220ENST00000641570 PRAF2O60831 178 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 PEX14O75381 377 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CRYZL1O95825 349 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 MOSP00540 346 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 HRASP01112 189 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 SNRNP70P08621 437 aaKnown RBP10.46□□□□□ -0.73
PHGDH-220ENST00000641570 FAM157CP0CG43 387 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CT45A6P0DMU7 189 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CT45A5P0DMU8 189 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CT45A7P0DMV0 189 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 F2RP25116 425 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 AKR1C2P52895 323 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 IFITM3Q01628 133 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 VMA21Q3ZAQ7 101 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-220ENST00000641570 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 ODF3L1Q8IXM7 274 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 SIGLECL1Q8N7X8 197 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 DMBX1Q8NFW5 382 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 CASTOR1Q8WTX7 329 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 ZFAND2BQ8WV99 257 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 RRNAD1Q96FB5 475 aaKnown RBP10.46□□□□□ -0.73
PHGDH-220ENST00000641570 HARBI1Q96MB7 349 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 MEGF9Q9H1U4 602 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 C5orf66Q9H5L9 145 aa10.46□□□□□ -0.73
PHGDH-220ENST00000641570 A0A1W2PPI3 338 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 H0YJW9 148 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 RBMXL2O75526 392 aaKnown RBP10.45□□□□□ -0.74
PHGDH-220ENST00000641570 HPRT1P00492 218 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 RPA2P15927 270 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 ANXA7P20073 488 aaKnown RBP10.45□□□□□ -0.74
PHGDH-220ENST00000641570 BTCP35070 178 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 DIAPH2-AS1Q14236 149 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 HNF4GQ14541 408 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 MMDQ15546 238 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 LY6EQ16553 131 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 SLC25A42Q86VD7 318 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 LDLRAD3Q86YD5 345 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-220ENST00000641570 VSTM2AQ8TAG5 236 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 OSR1Q8TAX0 266 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-220ENST00000641570 C17orf50Q8WW18 174 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 PHB2Q99623 299 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 BEX1Q9HBH7 125 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 FLVCR2Q9UPI3 526 aa10.45□□□□□ -0.74
PHGDH-220ENST00000641570 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
PHGDH-220ENST00000641570 MED13LQ71F56 2210 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms