RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 IDNKQ5T6J7 187 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 PYHIN1Q6K0P9 492 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
LINC00963-217ENST00000624009 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 RNF167Q9H6Y7 350 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 NECAP2Q9NVZ3 263 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 SDHAF2Q9NX18 166 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 ANXA10Q9UJ72 324 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 OR2W1Q9Y3N9 320 aa9.74□□□□□ -0.85
LINC00963-217ENST00000624009 TRAV41A0A0B4J266 112 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 M0R1X1 148 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 HLA-DQB1P01920 261 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 RPLP1P05386 114 aaKnown RBP9.73□□□□□ -0.85
LINC00963-217ENST00000624009 CLEC2LP0C7M8 214 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 CBX5P45973 191 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 CX3CL1P78423 397 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 PLGLAQ15195 96 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 PSG5Q15238 335 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 RTL8BQ17RB0 113 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 OXLD1Q5BKU9 147 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 GLDNQ6ZMI3 551 aaPredicted RBP9.73□□□□□ -0.85
LINC00963-217ENST00000624009 ZNF645Q8N7E2 425 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 NUDCD2Q8WVJ2 157 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 TMEM68Q96MH6 324 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 CMTM3Q96MX0 182 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 SLC35D1Q9NTN3 355 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
LINC00963-217ENST00000624009 RBM7Q9Y580 266 aaKnown RBP9.73□□□□□ -0.85
LINC00963-217ENST00000624009 NUBP2Q9Y5Y2 271 aa9.73□□□□□ -0.85
LINC00963-217ENST00000624009 IGKV1D-8A0A087WSZ0 117 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 NUDT19A8MXV4 375 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 XRCC3O43542 346 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 SSX5O60225 188 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 TUSC2O75896 110 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 DUTP33316 252 aaKnown RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 RPS19P39019 145 aaKnown RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 LUMP51884 338 aaPredicted RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 RPS16P62249 146 aaKnown RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 FHL3Q13643 280 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 UBE2NLQ5JXB2 153 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 TMEM65Q6PI78 240 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 OVCH2Q7RTZ1 564 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 C1QL4Q86Z23 238 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 DRAXINQ8NBI3 349 aaPredicted RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 OR13F1Q8NGS4 319 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 OR5H6Q8NGV6 325 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 OSR1Q8TAX0 266 aaPredicted RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 MAFIPQ8WZ33 124 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 DDB2Q92466 427 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 SLC25A46Q96AG3 418 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 S100A16Q96FQ6 103 aaKnown RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 ST6GALNAC5Q9BVH7 336 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 AUNIPQ9H7T9 357 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 PARP11Q9NR21 331 aa9.72□□□□□ -0.85
LINC00963-217ENST00000624009 METTL1Q9UBP6 276 aaKnown RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 ELF5Q9UKW6 265 aaPredicted RBP9.72□□□□□ -0.85
LINC00963-217ENST00000624009 TRAV18A0A075B6X5 111 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 H3BUA1 57 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 CCL24O00175 119 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 BRI3O95415 125 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 IGLV2-23P01705 113 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 RAB9AP51151 201 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 NDPQ00604 133 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
LINC00963-217ENST00000624009 PPP1R27Q86WC6 154 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 HOGA1Q86XE5 327 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 BEST4Q8NFU0 473 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 C5orf30Q96GV9 206 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 RAX2Q96IS3 184 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 HSD17B10Q99714 261 aaKnown RBP9.71□□□□□ -0.86
LINC00963-217ENST00000624009 SLA2Q9H6Q3 261 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
LINC00963-217ENST00000624009 VSIG4Q9Y279 399 aa9.71□□□□□ -0.86
LINC00963-217ENST00000624009 G3V318 75 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 I3L521 148 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 CRYGBP07316 175 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
LINC00963-217ENST00000624009 IGLL1P15814 213 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 CD40LGP29965 261 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 ZBTB34Q8NCN2 500 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 ACOT12Q8WYK0 555 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 ARPC1AQ92747 370 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 DPF1Q92782 380 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 HARBI1Q96MB7 349 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 FUNDC2Q9BWH2 189 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 MRPS7Q9Y2R9 242 aaKnown RBP9.7□□□□□ -0.86
LINC00963-217ENST00000624009 PRELID3BQ9Y3B1 194 aa9.7□□□□□ -0.86
LINC00963-217ENST00000624009 COL7A1Q02388 2944 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms