RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 RBMXL1Q96E39 390 aaKnown RBP9.44□□□□□ -0.9
CTCFL-221ENST00000608903 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
CTCFL-221ENST00000608903 IFI27L2Q9H2X8 130 aa9.44□□□□□ -0.9
CTCFL-221ENST00000608903 ONECUT1Q9UBC0 465 aa9.44□□□□□ -0.9
CTCFL-221ENST00000608903 MAP1AP78559 2803 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 C13orf42A0A1B0GVH6 325 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 KCNAB3O43448 404 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 CTSDP07339 412 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 GNG10P50151 68 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 LUMP51884 338 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 C11orf87Q6NUJ2 197 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 ZNF546Q86UE3 836 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 FAM219AQ8IW50 185 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 OR10A7Q8NGE5 316 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 C1orf159Q96HA4 380 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 A0A087X0M5 115 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 A0A1B0GX30 115 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 C5orf51A6NDU8 294 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 NUPL2O15504 423 aaKnown RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 FOXH1O75593 365 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 SLC25A4P12235 298 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 MMP9P14780 707 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 FGL1Q08830 312 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 CIARTQ8N365 385 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-221ENST00000608903 DRAM1Q8N682 238 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 TNFRSF14Q92956 283 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 SIRT7Q9NRC8 400 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
CTCFL-221ENST00000608903 A0A0B4J2A0 478 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 BCL2L11O43521 198 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 APOC3P02656 99 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 PIGPP57054 158 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-221ENST00000608903 KLRD1Q13241 179 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 LDLRAD2Q5SZI1 272 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
CTCFL-221ENST00000608903 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 ZNF251Q9BRH9 671 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 TMEM133Q9H2Q1 129 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 SHPKQ9UHJ6 478 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 C14orf166Q9Y224 244 aaKnown RBP9.42□□□□□ -0.9
CTCFL-221ENST00000608903 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
CTCFL-221ENST00000608903 TNFSF12O43508 249 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ENSAO43768 121 aaKnown RBP9.41□□□□□ -0.9
CTCFL-221ENST00000608903 OR2F2O95006 317 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 OR2F1Q13607 317 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 DIAPH2-AS1Q14236 149 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 RPL39P5Q59GN2 51 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 FAM74A1Q5RGS3 127 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 INSIG2Q9Y5U4 225 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 CRYM-AS1A6NIL9 109 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 H0YIZ8 118 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 M0R1W7 72 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 GPR31O00270 319 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 PGLYRP1O75594 196 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-221ENST00000608903 RBP4P02753 201 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 DVL1P1P54792 670 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-221ENST00000608903 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
CTCFL-221ENST00000608903 PAX8Q06710 450 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 FAM74A3Q4VXF1 159 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ABHD12Q8N2K0 398 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 PNKDQ8N490 385 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 FOXC2Q99958 501 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ABHD14AQ9BUJ0 271 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 COMMD9Q9P000 198 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 MBD2Q9UBB5 411 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 KCNS2Q9ULS6 477 aa9.41□□□□□ -0.9
CTCFL-221ENST00000608903 ZNF469Q96JG9 3925 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-221ENST00000608903 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 J3QR06 171 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 HOXB5P09067 269 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 PRTN3P24158 256 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 COX7A1P24310 79 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 ECI1P42126 302 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 BRWD1-AS2P59051 145 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 IL15RAQ13261 267 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 SP6Q3SY56 376 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 VMO1Q7Z5L0 202 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 ZNF645Q8N7E2 425 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 NMES1Q9C002 83 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
CTCFL-221ENST00000608903 RBM7Q9Y580 266 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms