RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ANGPTL5Q86XS5 388 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SERPINA12Q8IW75 414 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 PACRGLQ8N7B6 248 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SAMD12Q8N8I0 201 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM185AQ8NFB2 350 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR11H6Q8NGC7 330 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 LINC01006Q8NI28 216 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 APH1BQ8WW43 257 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 H1FXQ92522 213 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 MALSU1Q96EH3 234 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ADAT3Q96EY9 351 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 PELI1Q96FA3 418 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF488Q96MN9 340 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 OPALINQ96PE5 141 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 S1PR3Q99500 378 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TBX5Q99593 518 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SLC29A1Q99808 456 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 CITED1Q99966 193 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 COMMD4Q9H0A8 199 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 NCOR1P1Q9H4R4 102 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 RANBP3Q9H6Z4 567 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 NEK6Q9HC98 313 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 SIRT7Q9NRC8 400 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 C19orf12Q9NSK7 152 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 ONECUT1Q9UBC0 465 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 GNG8Q9UK08 70 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 VPREB3Q9UKI3 123 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPL36Q9Y3U8 105 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TBL2Q9Y4P3 447 aaKnown RBP2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 GMPPBQ9Y5P6 360 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 LINC00312Q9Y6C7 94 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 HSPE1-MOB4S4R3N1 261 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
CKS1BP3-201ENST00000600888 TRRAPQ9Y4A5 3859 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FAM230AA0A1W2PPH8 454 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 hADV38S2A0JD32 116 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 IRGMA1A4Y4 181 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FUOMA2VDF0 154 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 BTBD17A6NE02 478 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 A6NIN4 97 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FOXI3A8MTJ6 420 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ODF3BA8MYP8 253 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 J3QLW9 94 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CASQ2O14958 399 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 SULT1B1O43704 296 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 WBP4O75554 376 aaKnown RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 GPX5O75715 221 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 HAND1O96004 215 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 PAHP00439 452 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TFF1P04155 84 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ALDOBP05062 364 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 LIMS3P0CW19 117 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 LIMS4P0CW20 117 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CGB3P0DN86 165 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CGB7P0DN87 165 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 IGHV1-8P0DP01 117 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 PIPP12273 146 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CCL3L1P16619 93 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF19P17023 458 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 DCKP27707 260 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CD34P28906 385 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 NPBWR2P48146 333 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 KCNJ3P48549 501 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 EFNB2P52799 333 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 GBX2P52951 348 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 GMFBP60983 142 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ADARB1P78563 741 aaKnown RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 KLRD1Q13241 179 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 IL18R1Q13478 541 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q1RN00 199 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 LRRC75BQ2VPJ9 315 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 MINOS1Q5TGZ0 78 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF691Q5VV52 312 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TTC23Q5W5X9 447 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ELP2Q6IA86 826 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR52W1Q6IF63 320 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPL22L1Q6P5R6 122 aaKnown RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 SLC25A26Q70HW3 274 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 GDPD3Q7L5L3 318 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TCF23Q7RTU1 214 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 LHFPL3Q86UP9 236 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 RDH10Q8IZV5 341 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FAM58AQ8N1B3 248 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF676Q8N7Q3 588 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 CHST4Q8NCG5 386 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF555Q8NEP9 628 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 PXT1Q8NFP0 134 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 BEST4Q8NFU0 473 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR51A4Q8NGJ6 313 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR51T1Q8NGJ9 327 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR52I1Q8NGK6 324 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR5D14Q8NGL3 314 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR10AC1Q8NH08 325 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR5AK2Q8NH90 309 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 TRMT10AQ8TBZ6 339 aaKnown RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 PIFOQ8TCI5 191 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 EMG1Q92979 244 aaKnown RBP2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FAM46BQ96A09 425 aa2.68□□□□□ -1.98
CKS1BP3-201ENST00000600888 FGGYQ96C11 551 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms