RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 MMDQ15546 238 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 C5orf64Q2M2E5 130 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 PRR31Q5SQ13 230 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 DHRS11Q6UWP2 260 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 GIMAP1Q8WWP7 306 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 NOL4LQ96MY1 436 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 SOSTQ9BQB4 213 aa15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 RBMX2Q9Y388 322 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-221ENST00000599833 SMIM31A0A1B0GVY4 71 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 IGLV2-23P01705 113 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 RFX2P48378 723 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 DYRK1AQ13627 763 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 C9orf152Q5JTZ5 239 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 PDPNQ86YL7 162 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 C11orf44Q8N8P7 122 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 RNF5Q99942 180 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 IFT46Q9NQC8 304 aa15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 RSL24D1Q9UHA3 163 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-221ENST00000599833 TNCP24821 2201 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 IGHV7-81A0A0B4J1V7 117 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 RBBP9O75884 186 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 HLA-DRB1P01911 266 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 PMP2P02689 132 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 CRYGBP07316 175 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 SSBP2P81877 361 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 NDPQ00604 133 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 CFHR3Q02985 330 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 MSMO1Q15800 293 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 MRGPRG-AS1Q2M3A8 158 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 FOXB2Q5VYV0 432 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 SLC35E3Q7Z769 313 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 OR52I2Q8NH67 350 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 SGMS2Q8NHU3 365 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 SLC35D1Q9NTN3 355 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 KLK11Q9UBX7 282 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 LINC00527Q9UJ94 153 aa15.36■□□□□ 0.05
SHKBP1-221ENST00000599833 SRRM4A7MD48 611 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 FCN1O00602 326 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 RRHO14718 337 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 NOL3O60936 208 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 RCVRNP35243 200 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 HRH1P35367 487 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 THBS3P49746 956 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 CD83Q01151 205 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 PSG5Q15238 335 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 TMEM177Q53S58 311 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 GPHA2Q96T91 129 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 RASL11BQ9BPW5 248 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 CCL28Q9NRJ3 127 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 TPSG1Q9NRR2 321 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 EHFQ9NZC4 300 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 ZNF580Q9UK33 172 aa15.35■□□□□ 0.05
SHKBP1-221ENST00000599833 H7C2Y5 167 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 RGS5O15539 181 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 IGF1P05019 195 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 HLA-DMAP28067 261 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 DGCR2P98153 550 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 C19orf54Q5BKX5 351 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 STPG2Q8N412 459 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 BVESQ8NE79 360 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 OR5AU1Q8NGC0 362 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 CITED2Q99967 270 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 FXYD6Q9H0Q3 95 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 FBXL15Q9H469 300 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 MTFP1Q9UDX5 166 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 FBXO7Q9Y3I1 522 aa15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 RBM7Q9Y580 266 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-221ENST00000599833 FBXO24O75426 580 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 TSPAN15O95858 294 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 APOA2P02652 100 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 EGR2P11161 476 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 TNFSF8P32971 234 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 TAS2R46P59540 309 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 ARSJQ5FYB0 599 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 RNASE12Q5GAN4 147 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 OR5H2Q8NGV7 314 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 MOB3AQ96BX8 217 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 ADTRPQ96IZ2 230 aa15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 C6orf62Q9GZU0 229 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-221ENST00000599833 MEGF8Q7Z7M0 2845 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 PEX14O75381 377 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 SLC22A5O76082 557 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 SPDEFO95238 335 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 GNRHRP30968 328 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 VAX1Q5SQQ9 334 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 ZNF818PQ6ZRF7 136 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 ZNF329Q86UD4 541 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 MCFD2Q8NI22 146 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 SECTM1Q8WVN6 248 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 ZNF2Q9BSG1 426 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 DCUN1D5Q9BTE7 237 aa15.32■□□□□ 0.04
SHKBP1-221ENST00000599833 PSMB11A5LHX3 300 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 DPPA5A6NC42 116 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 GABARAPH6UMI1 98 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 AP4M1O00189 453 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 CTDSPLO15194 276 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 KCNAB3O43448 404 aa15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 PPIFP30405 207 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 CRIP2P52943 208 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-221ENST00000599833 TAGLNQ01995 201 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms