RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	MSMO1	Q15800	293 aa		18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	RNASE12	Q5GAN4	147 aa	Known RBP	18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	FAM71E2	Q8N5Q1	922 aa		18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	SMIM4	Q8WVI0	70 aa		18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	ADTRP	Q96IZ2	230 aa		18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	RNF5	Q99942	180 aa		18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	RBMX2	Q9Y388	322 aa	Known RBP	18.84	■□□□□ 0.61
ERBB2-209	ENST00000578709	SH2D7	A6NKC9	451 aa	Predicted RBP	18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709		H7C2Y5	167 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	APOA2	P02652	100 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	DUT	P33316	252 aa	Known RBP	18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	THBS3	P49746	956 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	TAGLN	Q01995	201 aa	Known RBP	18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	SSBP1	Q04837	148 aa	Known RBP	18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	MMD	Q15546	238 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	ACTBL2	Q562R1	376 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	PDPN	Q86YL7	162 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	NPB	Q8NG41	125 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	DDB2	Q92466	427 aa		18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	LIN7C	Q9NUP9	197 aa	Known RBP	18.83	■□□□□ 0.6
ERBB2-209	ENST00000578709	VDAC2	P45880	294 aa	Predicted RBP	18.82	■□□□□ 0.6
ERBB2-209	ENST00000578709	EIF4EBP1	Q13541	118 aa	Predicted RBP	18.82	■□□□□ 0.6
ERBB2-209	ENST00000578709	WNT10A	Q9GZT5	417 aa		18.82	■□□□□ 0.6
ERBB2-209	ENST00000578709	ZNF107	Q9UII5	783 aa	Predicted RBP	18.82	■□□□□ 0.6
ERBB2-209	ENST00000578709	FABP12	A6NFH5	140 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	HAX1	O00165	279 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	NBR2	O15453	112 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	NDUFA3	O95167	84 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	IGKV1-16	P04430	117 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	TBP	P20226	339 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	CNTFR	P26992	372 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	S100A5	P33763	92 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	KRTAP10-3	P60369	221 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	TMEM95	Q3KNT9	176 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	VAX1	Q5SQQ9	334 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	SHISA2	Q6UWI4	295 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	SECTM1	Q8WVN6	248 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	MOB3A	Q96BX8	217 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	ZNF2	Q9BSG1	426 aa	Predicted RBP	18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	SLC35D1	Q9NTN3	355 aa		18.81	■□□□□ 0.6
ERBB2-209	ENST00000578709	LINC00473	A8K010	186 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	GSTZ1	O43708	216 aa	Predicted RBP	18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	HERV-K104	P61576	105 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	ARSJ	Q5FYB0	599 aa	Predicted RBP	18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	C9orf152	Q5JTZ5	239 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	KLHDC1	Q8N7A1	406 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	ZBTB34	Q8NCN2	500 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	OR6F1	Q8NGZ6	308 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	WIPF2	Q8TF74	440 aa	Predicted RBP	18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	HSD17B10	Q99714	261 aa	Known RBP	18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	RASL11B	Q9BPW5	248 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	SLC5A7	Q9GZV3	580 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	CCL28	Q9NRJ3	127 aa		18.8	■□□□□ 0.6
ERBB2-209	ENST00000578709	IGHG2	P01859	326 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	RRAS	P10301	218 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	FXYD4	P59646	89 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	CCDC190	Q86UF4	302 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	TMEM229B	Q8NBD8	167 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	FLYWCH2	Q96CP2	140 aa	Known RBP	18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709	CITED1	Q99966	193 aa		18.79	■□□□□ 0.6
ERBB2-209	ENST00000578709		A6NHS1	94 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	CD74	P04233	296 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	CD3D	P04234	171 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	TSPAN5	P62079	268 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	RTL8B	Q17RB0	113 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	C5orf64	Q2M2E5	130 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709	BVES	Q8NE79	360 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709		V9GYH0	126 aa		18.78	■□□□□ 0.6
ERBB2-209	ENST00000578709		M0QYG6	137 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	RRH	O14718	337 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	VSIG10L2	P0DP72	767 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	TAS2R19	P59542	299 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	RPL30	P62888	115 aa	Known RBP	18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	SRSF4	Q08170	494 aa	Known RBP	18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	TMEM177	Q53S58	311 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	RNASE10	Q5GAN6	216 aa	Known RBP	18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	ZNF66	Q6ZN08	573 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	KCTD9	Q7L273	389 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	TMEM17	Q86X19	198 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	OR6Q1	Q8NGQ2	317 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	TSNAX	Q99598	290 aa	Known RBP	18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	TINAGL1	Q9GZM7	467 aa	Predicted RBP	18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	FXYD6	Q9H0Q3	95 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	KIAA1456	Q9P272	454 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	PLXNB1	O43157	2135 aa		18.77	■□□□□ 0.6
ERBB2-209	ENST00000578709	SPDEF	O95238	335 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	HLA-DRB1	P01911	266 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	PTBP1	P26599	531 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	GNRHR	P30968	328 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	ETV6	P41212	452 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	LGALS7	P47929	136 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	RPS16	P62249	146 aa	Known RBP	18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	CBX3	Q13185	183 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	ZNF818P	Q6ZRF7	136 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	SLC35E3	Q7Z769	313 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	MFSD4A	Q8N468	514 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	BORCS5	Q969J3	196 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	TAS2R8	Q9NYW2	309 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	PRELID3B	Q9Y3B1	194 aa		18.76	■□□□□ 0.59
ERBB2-209	ENST00000578709	KCNAB3	O43448	404 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms