RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 GINS4Q9BRT9 223 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 OR2D2Q9H210 308 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 GNB4Q9HAV0 340 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 RHBDL2Q9NX52 303 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 VSIG4Q9Y279 399 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 FBXO7Q9Y3I1 522 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 RBM7Q9Y580 266 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 NOTCH3Q9UM47 2321 aa9.91□□□□□ -0.82
NPLOC4-213ENST00000573519 DNAH3Q8TD57 4116 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 TMEM235A6NFC5 223 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 FCN1O00602 326 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 PROP1O75360 226 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 IGLV1-40P01703 118 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 IGKV1-16P04430 117 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 RAB9AP51151 201 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 LUMP51884 338 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 NDPQ00604 133 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 PSG5Q15238 335 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 PDPNQ86YL7 162 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 ZNF491Q8N8L2 437 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 CASTOR1Q8WTX7 329 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 NUDCD2Q8WVJ2 157 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 SLC25A38Q96DW6 304 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 UBE2E2Q96LR5 201 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 TSNAXQ99598 290 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 RNF5Q99942 180 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 CABLES2Q9BTV7 478 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 ST6GALNAC5Q9BVH7 336 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
NPLOC4-213ENST00000573519 TRBV6-7A0A0A0MS04 114 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 TRIM64CA6NLI5 447 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 CA2P00918 260 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 RPS19P39019 145 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 DGCR2P98153 550 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 TMEM267Q0VDI3 215 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 TIMM50Q3ZCQ8 353 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 ZNF260Q3ZCT1 412 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 HACD4Q5VWC8 232 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 UNQ5815/PRO19632Q6UWF5 114 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 PPP1R27Q86WC6 154 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 MINDY2Q8NBR6 621 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 OR1N2Q8NGR9 330 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 FLYWCH2Q96CP2 140 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 SDHAF2Q9NX18 166 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 ZMAT5Q9UDW3 170 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 GAB2Q9UQC2 676 aa9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 FOXA2Q9Y261 457 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-213ENST00000573519 TRAV18A0A075B6X5 111 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 J3QRK9 145 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 SLC25A17O43808 307 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 SSX5O60225 188 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 DTYMKP23919 212 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 GNB1P62873 340 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 CBX3Q13185 183 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 ARL6IP1Q15041 203 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 TCTEX1D1Q8N7M0 179 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 LFNGQ8NES3 379 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 GRPEL2Q8TAA5 225 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 MYOZ3Q8TDC0 251 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 MS4A10Q96PG2 267 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 TOLLIPQ9H0E2 274 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 TPSG1Q9NRR2 321 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 ETV7Q9Y603 341 aa9.88□□□□□ -0.83
NPLOC4-213ENST00000573519 I3L521 148 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 SOX15O60248 233 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 SPDEFO95238 335 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 CNIH1O95406 144 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 PTHLHP12272 177 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 CD40LGP29965 261 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 GNG2P59768 71 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 NCS1P62166 190 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 ZNF616Q08AN1 781 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 FHL3Q13643 280 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 KIAA0141Q14154 515 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 BVESQ8NE79 360 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 ARPC1AQ92747 370 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 C5orf30Q96GV9 206 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 HARBI1Q96MB7 349 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 FUNDC2Q9BWH2 189 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 ALX4Q9H161 411 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 ZNF355PQ9NSJ1 428 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 SPATA2Q9UM82 520 aa9.87□□□□□ -0.83
NPLOC4-213ENST00000573519 SHOXO15266 292 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 SCGNO76038 276 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 DIRAS3O95661 229 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 FCER2P06734 321 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 EGR2P11161 476 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 ECI1P42126 302 aa9.86□□□□□ -0.83
NPLOC4-213ENST00000573519 CRIP2P52943 208 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms