RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF709Q8N972 641 aa14.66□□□□□ -0.06
SCARF1-205ENST00000571272 TMEM170AQ8WVE7 144 aa14.66□□□□□ -0.06
SCARF1-205ENST00000571272 KCNIP1Q9NZI2 227 aa14.66□□□□□ -0.06
SCARF1-205ENST00000571272 WIPI2Q9Y4P8 454 aa14.66□□□□□ -0.06
SCARF1-205ENST00000571272 COL6A3P12111 3177 aa14.66□□□□□ -0.06
SCARF1-205ENST00000571272 B4E171 279 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 TSPAN7P41732 249 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 BRWD1-AS2P59051 145 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 UBE2G2P60604 165 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 AESQ08117 197 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 GALMQ96C23 342 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 NEIL1Q96FI4 390 aaPredicted RBP14.65□□□□□ -0.06
SCARF1-205ENST00000571272 POLDIP2Q9Y2S7 368 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 C12orf77C9JDV5 145 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 C11orf94C9JXX5 98 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 PDGFBP01127 241 aaPredicted RBP14.65□□□□□ -0.06
SCARF1-205ENST00000571272 RAC2P15153 192 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 GCSAMLQ5JQS6 135 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 MANBALQ9NQG1 85 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 WASF3Q9UPY6 502 aa14.65□□□□□ -0.06
SCARF1-205ENST00000571272 MKRN2OSH3BPM6 223 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 WNT9BO14905 357 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 MBP02144 154 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 LPAL2Q16609 132 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 ATP6V1FQ16864 119 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 COA6Q5JTJ3 125 aaKnown RBP14.64□□□□□ -0.07
SCARF1-205ENST00000571272 ZNF826PQ6ZT77 177 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 ANAPC16Q96DE5 110 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 GP6Q9HCN6 339 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 HAND1O96004 215 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 PAX1P15863 534 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 ZNF146Q15072 292 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 FAM78BQ5VT40 261 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 TPRX1Q8N7U7 411 aa14.64□□□□□ -0.07
SCARF1-205ENST00000571272 IGHV3-43A0A0B4J1X8 118 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 IGHV3-43DP0DP04 118 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 MPLP40238 635 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 TAS2R60P59551 318 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 ACTL10Q5JWF8 245 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 MRPL41Q8IXM3 137 aaKnown RBP14.63□□□□□ -0.07
SCARF1-205ENST00000571272 Q8IYB0 196 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 BCL2L2Q92843 193 aaPredicted RBP14.63□□□□□ -0.07
SCARF1-205ENST00000571272 ACY3Q96HD9 319 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 OR6C3Q9NZP0 311 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 TRAV38-1A0A0B4J264 116 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 PGPEP1LA6NFU8 196 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 CER1O95813 267 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 P0C879 139 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 CST9LP1Q5W188 147 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 MRGPRDQ8TDS7 321 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 DERL1Q9BUN8 251 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 HBZP02008 142 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 PPP1CBP62140 327 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 TBC1D28Q2M2D7 210 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 H2BFWTQ7Z2G1 175 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 RFESDQ8TAC1 157 aa14.63□□□□□ -0.07
SCARF1-205ENST00000571272 DEFB108AA8MXU0 73 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 GGCTO75223 188 aaKnown RBP14.62□□□□□ -0.07
SCARF1-205ENST00000571272 CDC34P49427 236 aaPredicted RBP14.62□□□□□ -0.07
SCARF1-205ENST00000571272 A0A1B0GUS0 222 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 TMEM30CPA0ZSE6 113 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 OR4A8P0C604 315 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 SELLP14151 372 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 GABRA2P47869 451 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 ATP5G3P48201 142 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 CATR1Q13166 79 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 SSX2Q16385 188 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 NINJ1Q92982 152 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 DEFB127Q9H1M4 99 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
SCARF1-205ENST00000571272 GCGP01275 180 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 PDLIM4P50479 330 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 FBXW9Q5XUX1 488 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 SLC25A40Q8TBP6 338 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 NANOS1Q8WY41 292 aaKnown RBP14.61□□□□□ -0.07
SCARF1-205ENST00000571272 TMEM18Q96B42 140 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 PLPPR2Q96GM1 343 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 SMPD2O60906 423 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 NDUFB4O95168 129 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 IL3RAP26951 378 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 EDDM3BP56851 147 aa14.61□□□□□ -0.07
SCARF1-205ENST00000571272 A0A0U1RQK1 487 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 ZNF320A2RRD8 509 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 LINC00473A8K010 186 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 SSTR5P35346 364 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 GNB1P62873 340 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 LTC4SQ16873 150 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 ACOT6Q3I5F7 207 aaPredicted RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 TMPRSS7Q7RTY8 843 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 NOL4LQ96MY1 436 aaPredicted RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 TMEM204Q9BSN7 226 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 NDUFAF3Q9BU61 184 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 DDA1Q9BW61 102 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 OBP2BQ9NPH6 170 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 KMT2EQ8IZD2 1858 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 C1QTNF9P0C862 333 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 SRP14P37108 136 aaKnown RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 CNN1P51911 297 aaKnown RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 KCNIP4Q6PIL6 250 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 Q6ZR03 302 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms