RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 LSM3P62310 102 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 PSG5Q15238 335 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 CNIH2Q6PI25 160 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 OR13F1Q8NGS4 319 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 MYOZ3Q8TDC0 251 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 TSNAXQ99598 290 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 FUNDC2Q9BWH2 189 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 ANXA10Q9UJ72 324 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 TRAV41A0A0B4J266 112 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 G3V318 75 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 CRIP2P52943 208 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 CX3CL1P78423 397 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 PLGLAQ15195 96 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 C19orf54Q5BKX5 351 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 ZNF660Q6AZW8 331 aaPredicted RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 SLC25A46Q96AG3 418 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 P2RX4Q99571 388 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 DIABLOQ9NR28 239 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 METTL1Q9UBP6 276 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 FBXO7Q9Y3I1 522 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 OR2W1Q9Y3N9 320 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 RBM7Q9Y580 266 aaKnown RBP13.39□□□□□ -0.27
KNOP1-205ENST00000568230 WSB1Q9Y6I7 421 aa13.39□□□□□ -0.27
KNOP1-205ENST00000568230 FCN1O00602 326 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 IGLV1-40P01703 118 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 CDX1P47902 265 aaPredicted RBP13.38□□□□□ -0.27
KNOP1-205ENST00000568230 NCS1P62166 190 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 UBE2NLQ5JXB2 153 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 MINDY2Q8NBR6 621 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 DDB2Q92466 427 aa13.38□□□□□ -0.27
KNOP1-205ENST00000568230 RCC1LQ96I51 464 aaKnown RBP13.38□□□□□ -0.27
KNOP1-205ENST00000568230 XRCC3O43542 346 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 TUSC2O75896 110 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 IGLV2-23P01705 113 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 HLA-DQB1P01920 261 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 IGLL1P15814 213 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 NFYAP23511 347 aaPredicted RBP13.37□□□□□ -0.27
KNOP1-205ENST00000568230 DUTP33316 252 aaKnown RBP13.37□□□□□ -0.27
KNOP1-205ENST00000568230 MYCNOSP40205 109 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 RPS16P62249 146 aaKnown RBP13.37□□□□□ -0.27
KNOP1-205ENST00000568230 RTL8BQ17RB0 113 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 ZNF645Q8N7E2 425 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 BEST4Q8NFU0 473 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 KCTD12Q96CX2 325 aaKnown RBP13.37□□□□□ -0.27
KNOP1-205ENST00000568230 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 ADTRPQ96IZ2 230 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
KNOP1-205ENST00000568230 SLC25A17O43808 307 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 CA2P00918 260 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 RRASP10301 218 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 EGR2P11161 476 aaPredicted RBP13.36□□□□□ -0.27
KNOP1-205ENST00000568230 LGALS7P47929 136 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 LUMP51884 338 aaPredicted RBP13.36□□□□□ -0.27
KNOP1-205ENST00000568230 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 TMEM177Q53S58 311 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 ZNF562Q6V9R5 426 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 HOGA1Q86XE5 327 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 GVQW1Q8N7I0 195 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 TCTEX1D1Q8N7M0 179 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 SAMD12Q8N8I0 201 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 C4orf3Q8WVX3 66 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 S100A16Q96FQ6 103 aaKnown RBP13.36□□□□□ -0.27
KNOP1-205ENST00000568230 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 TNCP24821 2201 aa13.36□□□□□ -0.27
KNOP1-205ENST00000568230 IGKV1D-13A0A0B4J2D9 117 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 LINC00473A8K010 186 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 CCL24O00175 119 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 SOX15O60248 233 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 SLC22A5O76082 557 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 DUS4LO95620 317 aaKnown RBP13.35□□□□□ -0.27
KNOP1-205ENST00000568230 IGLV2-14P01704 120 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 CRYGBP07316 175 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 IGKV1-13P0DP09 117 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 VBP1P61758 197 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 CBX3Q13185 183 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 REC114Q7Z4M0 266 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 BVESQ8NE79 360 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 NECAP2Q9NVZ3 263 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
KNOP1-205ENST00000568230 NUBP2Q9Y5Y2 271 aa13.35□□□□□ -0.27
KNOP1-205ENST00000568230 GABARAPO95166 117 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 PTHLHP12272 177 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 CBX5P45973 191 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 ARPC4P59998 168 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
KNOP1-205ENST00000568230 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
KNOP1-205ENST00000568230 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 TMEM65Q6PI78 240 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 PPP1R27Q86WC6 154 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 ABHD5Q8WTS1 349 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 ARPC1AQ92747 370 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 SNAPC3Q92966 411 aa13.34□□□□□ -0.27
KNOP1-205ENST00000568230 UBE2E2Q96LR5 201 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms