RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 DEFA6Q01524 100 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 ZNF66Q6ZN08 573 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 PDPNQ86YL7 162 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 TOMM5Q8N4H5 51 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 CAPSLQ8WWF8 208 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 PRRT1Q99946 306 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 CCDC32Q9BV29 185 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 ZNF747Q9BV97 191 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 MRPL20Q9BYC9 149 aaKnown RBP13.39□□□□□ -0.27
CLN6-208ENST00000567060 WDR12Q9GZL7 423 aaKnown RBP13.39□□□□□ -0.27
CLN6-208ENST00000567060 RANBP3Q9H6Z4 567 aaPredicted RBP13.39□□□□□ -0.27
CLN6-208ENST00000567060 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
CLN6-208ENST00000567060 IGKV1D-13A0A0B4J2D9 117 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 M0R1X1 148 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 GPR137BO60478 399 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 PROP1O75360 226 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 MOSP00540 346 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
CLN6-208ENST00000567060 IGKV1-13P0DP09 117 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 CD40LGP29965 261 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 CBX3Q13185 183 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 TRIQKQ629K1 86 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 LHFPL1Q86WI0 220 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 CMTM1Q8IZ96 169 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 SECTM1Q8WVN6 248 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
CLN6-208ENST00000567060 RBM14Q96PK6 669 aaKnown RBP13.38□□□□□ -0.27
CLN6-208ENST00000567060 SLC5A7Q9GZV3 580 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 WASHC3Q9Y3C0 194 aa13.38□□□□□ -0.27
CLN6-208ENST00000567060 H0YJW9 148 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 FGF16O43320 207 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 IGKV1D-33P01593 117 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 IGKV1-33P01594 117 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 AMY2AP04746 511 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 TMEM11P17152 192 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 DUTP33316 252 aaKnown RBP13.37□□□□□ -0.27
CLN6-208ENST00000567060 INPP1P49441 399 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 SURF2Q15527 256 aaPredicted RBP13.37□□□□□ -0.27
CLN6-208ENST00000567060 DHRS7BQ6IAN0 325 aaPredicted RBP13.37□□□□□ -0.27
CLN6-208ENST00000567060 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 MFSD4AQ8N468 514 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 BVESQ8NE79 360 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 TERB2Q8NHR7 220 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 TINAGL1Q9GZM7 467 aaPredicted RBP13.37□□□□□ -0.27
CLN6-208ENST00000567060 NPFFR1Q9GZQ6 430 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 SCP2D1Q9UJQ7 156 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 PRELID3BQ9Y3B1 194 aa13.37□□□□□ -0.27
CLN6-208ENST00000567060 M0QYG6 137 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 PAX6P26367 422 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 PPP5CP53041 499 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 FXYD4P59646 89 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 CATR1Q13166 79 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
CLN6-208ENST00000567060 HES1Q14469 280 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 RTL8BQ17RB0 113 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 Q8N6K4 173 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 TCTEX1D1Q8N7M0 179 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 OR4C16Q8NGL9 310 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 EAF1Q96JC9 268 aaPredicted RBP13.36□□□□□ -0.27
CLN6-208ENST00000567060 SCGB3A2Q96PL1 93 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 C7orf50Q9BRJ6 194 aaKnown RBP13.36□□□□□ -0.27
CLN6-208ENST00000567060 SLC25A33Q9BSK2 321 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
CLN6-208ENST00000567060 A0A1B0GUS0 222 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 FAM181BA6NEQ2 426 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 NAP1L6A6NFF2 107 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 GPR31O00270 319 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 NDUFA7O95182 113 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 ZNF735P0CB33 412 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 GNRHRP30968 328 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 EIF4EBP1Q13541 118 aaPredicted RBP13.35□□□□□ -0.27
CLN6-208ENST00000567060 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 LY6EQ16553 131 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 AADACL3Q5VUY0 350 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 ZNF383Q8NA42 475 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 OR4C13Q8NGP0 309 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 ZFAND1Q8TCF1 268 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 CD300LFQ8TDQ1 290 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 DDB2Q92466 427 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 DUX5Q96PT3 197 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 RSRP1Q9BUV0 290 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 FXYD6Q9H0Q3 95 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 CCL28Q9NRJ3 127 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 FAM212BQ9NTI7 297 aaPredicted RBP13.35□□□□□ -0.27
CLN6-208ENST00000567060 SLC35D1Q9NTN3 355 aa13.35□□□□□ -0.27
CLN6-208ENST00000567060 RBFOX2O43251 390 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLN6-208ENST00000567060 TSPAN9O75954 239 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 SPDEFO95238 335 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 HKR1P10072 659 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 LGALS7P47929 136 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 C11orf88Q6PI97 169 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 CCBE1Q6UXH8 406 aaPredicted RBP13.34□□□□□ -0.27
CLN6-208ENST00000567060 KCTD9Q7L273 389 aa13.34□□□□□ -0.27
CLN6-208ENST00000567060 OR4D10Q8NGI6 311 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms